Gene : Carub.0003s1925 C. rubella v1.1
Defline:  (1 of 1) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  1925
Name:  ? Carub.0003s1925 Secondary Identifier:  ? PAC:39239365
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1925 0.5kb upstream 0.5kb upstream 2955 true scaffold_3: 6897635-6900589 Capsella rubella
Carub.0003s1925 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6897635-6898134 Capsella rubella
Carub.0003s1925 0.5kb downstream 0.5kb downstream 2955 true scaffold_3: 6898135-6901089 Capsella rubella
Carub.0003s1925 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6900590-6901089 Capsella rubella
Carub.0003s1925 1.0kb upstream 1.0kb upstream 3455 true scaffold_3: 6897135-6900589 Capsella rubella
Carub.0003s1925 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6897135-6898134 Capsella rubella
Carub.0003s1925 1.0kb downstream 1.0kb downstream 3455 true scaffold_3: 6898135-6901589 Capsella rubella
Carub.0003s1925 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6900590-6901589 Capsella rubella
Carub.0003s1925 2.0kb upstream 2.0kb upstream 4455 true scaffold_3: 6896135-6900589 Capsella rubella
Carub.0003s1925 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6896135-6898134 Capsella rubella
Carub.0003s1925 2.0kb downstream 2.0kb downstream 4455 true scaffold_3: 6898135-6902589 Capsella rubella
Carub.0003s1925 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6900590-6902589 Capsella rubella
Carub.0003s1925 5.0kb upstream 5.0kb upstream 7455 true scaffold_3: 6893135-6900589 Capsella rubella
Carub.0003s1925 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6893135-6898134 Capsella rubella
Carub.0003s1925 5.0kb downstream 5.0kb downstream 7455 true scaffold_3: 6898135-6905589 Capsella rubella
Carub.0003s1925 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6900590-6905589 Capsella rubella
Carub.0003s1925 10.0kb upstream 10.0kb upstream 12455 true scaffold_3: 6888135-6900589 Capsella rubella
Carub.0003s1925 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6888135-6898134 Capsella rubella
Carub.0003s1925 10.0kb downstream 10.0kb downstream 12455 true scaffold_3: 6898135-6910589 Capsella rubella
Carub.0003s1925 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6900590-6910589 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366754 5261 Brassicaceae View MSA
123830900 5264 Brassicales-Malvales View MSA
124338997 5266 SBM View MSA
124240525 5268 Malvidae View MSA
124062896 5270 Rosid View MSA
123739402 5271 Pentapetalae View MSA
122789155 5272 Eudicot View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain