Gene : Carub.0003s1939 C. rubella v1.1
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  1939
Name:  ? Carub.0003s1939 Secondary Identifier:  ? PAC:39240454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1939 0.5kb upstream 0.5kb upstream 2706 true scaffold_3: 6959304-6962009 Capsella rubella
Carub.0003s1939 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6961510-6962009 Capsella rubella
Carub.0003s1939 0.5kb downstream 0.5kb downstream 2706 true scaffold_3: 6958804-6961509 Capsella rubella
Carub.0003s1939 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6958804-6959303 Capsella rubella
Carub.0003s1939 1.0kb upstream 1.0kb upstream 3206 true scaffold_3: 6959304-6962509 Capsella rubella
Carub.0003s1939 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6961510-6962509 Capsella rubella
Carub.0003s1939 1.0kb downstream 1.0kb downstream 3206 true scaffold_3: 6958304-6961509 Capsella rubella
Carub.0003s1939 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6958304-6959303 Capsella rubella
Carub.0003s1939 2.0kb upstream 2.0kb upstream 4206 true scaffold_3: 6959304-6963509 Capsella rubella
Carub.0003s1939 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6961510-6963509 Capsella rubella
Carub.0003s1939 2.0kb downstream 2.0kb downstream 4206 true scaffold_3: 6957304-6961509 Capsella rubella
Carub.0003s1939 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6957304-6959303 Capsella rubella
Carub.0003s1939 5.0kb upstream 5.0kb upstream 7206 true scaffold_3: 6959304-6966509 Capsella rubella
Carub.0003s1939 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6961510-6966509 Capsella rubella
Carub.0003s1939 5.0kb downstream 5.0kb downstream 7206 true scaffold_3: 6954304-6961509 Capsella rubella
Carub.0003s1939 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6954304-6959303 Capsella rubella
Carub.0003s1939 10.0kb upstream 10.0kb upstream 12206 true scaffold_3: 6959304-6971509 Capsella rubella
Carub.0003s1939 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6961510-6971509 Capsella rubella
Carub.0003s1939 10.0kb downstream 10.0kb downstream 12206 true scaffold_3: 6949304-6961509 Capsella rubella
Carub.0003s1939 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6949304-6959303 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367548 5261 Brassicaceae View MSA
123834558 5264 Brassicales-Malvales View MSA
124340418 5266 SBM View MSA
124251423 5268 Malvidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain