Gene : Carub.0003s2471 C. rubella v1.1
Defline:  (1 of 3) PTHR27001:SF89 - PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK1-RELATED Genomic Order:  2471
Name:  ? Carub.0003s2471 Secondary Identifier:  ? PAC:39241674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2471 0.5kb upstream 0.5kb upstream 3754 true scaffold_3: 9142990-9146743 Capsella rubella
Carub.0003s2471 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9146244-9146743 Capsella rubella
Carub.0003s2471 0.5kb downstream 0.5kb downstream 3754 true scaffold_3: 9142490-9146243 Capsella rubella
Carub.0003s2471 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9142490-9142989 Capsella rubella
Carub.0003s2471 1.0kb upstream 1.0kb upstream 4254 true scaffold_3: 9142990-9147243 Capsella rubella
Carub.0003s2471 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9146244-9147243 Capsella rubella
Carub.0003s2471 1.0kb downstream 1.0kb downstream 4254 true scaffold_3: 9141990-9146243 Capsella rubella
Carub.0003s2471 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9141990-9142989 Capsella rubella
Carub.0003s2471 2.0kb upstream 2.0kb upstream 5254 true scaffold_3: 9142990-9148243 Capsella rubella
Carub.0003s2471 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9146244-9148243 Capsella rubella
Carub.0003s2471 2.0kb downstream 2.0kb downstream 5254 true scaffold_3: 9140990-9146243 Capsella rubella
Carub.0003s2471 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9140990-9142989 Capsella rubella
Carub.0003s2471 5.0kb upstream 5.0kb upstream 8254 true scaffold_3: 9142990-9151243 Capsella rubella
Carub.0003s2471 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9146244-9151243 Capsella rubella
Carub.0003s2471 5.0kb downstream 5.0kb downstream 8254 true scaffold_3: 9137990-9146243 Capsella rubella
Carub.0003s2471 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9137990-9142989 Capsella rubella
Carub.0003s2471 10.0kb upstream 10.0kb upstream 13254 true scaffold_3: 9142990-9156243 Capsella rubella
Carub.0003s2471 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9146244-9156243 Capsella rubella
Carub.0003s2471 10.0kb downstream 10.0kb downstream 13254 true scaffold_3: 9132990-9146243 Capsella rubella
Carub.0003s2471 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9132990-9142989 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381545 5261 Brassicaceae View MSA
123836108 5264 Brassicales-Malvales View MSA
124342587 5266 SBM View MSA
124253534 5268 Malvidae View MSA
124074896 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain