Gene : Carub.0003s1719 C. rubella v1.1

Defline:  (1 of 2) K02906 - large subunit ribosomal protein L3 (RP-L3, MRPL3, rplC) Genomic Order:  1719
Name:  ? Carub.0003s1719 Secondary Identifier:  ? PAC:39241997

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1719 0.5kb upstream 0.5kb upstream 2315 true scaffold_3: 6092954-6095268 Capsella rubella
Carub.0003s1719 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6094769-6095268 Capsella rubella
Carub.0003s1719 0.5kb downstream 0.5kb downstream 2315 true scaffold_3: 6092454-6094768 Capsella rubella
Carub.0003s1719 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6092454-6092953 Capsella rubella
Carub.0003s1719 1.0kb upstream 1.0kb upstream 2815 true scaffold_3: 6092954-6095768 Capsella rubella
Carub.0003s1719 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6094769-6095768 Capsella rubella
Carub.0003s1719 1.0kb downstream 1.0kb downstream 2815 true scaffold_3: 6091954-6094768 Capsella rubella
Carub.0003s1719 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6091954-6092953 Capsella rubella
Carub.0003s1719 2.0kb upstream 2.0kb upstream 3815 true scaffold_3: 6092954-6096768 Capsella rubella
Carub.0003s1719 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6094769-6096768 Capsella rubella
Carub.0003s1719 2.0kb downstream 2.0kb downstream 3815 true scaffold_3: 6090954-6094768 Capsella rubella
Carub.0003s1719 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6090954-6092953 Capsella rubella
Carub.0003s1719 5.0kb upstream 5.0kb upstream 6815 true scaffold_3: 6092954-6099768 Capsella rubella
Carub.0003s1719 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6094769-6099768 Capsella rubella
Carub.0003s1719 5.0kb downstream 5.0kb downstream 6815 true scaffold_3: 6087954-6094768 Capsella rubella
Carub.0003s1719 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6087954-6092953 Capsella rubella
Carub.0003s1719 10.0kb upstream 10.0kb upstream 11815 true scaffold_3: 6092954-6104768 Capsella rubella
Carub.0003s1719 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6094769-6104768 Capsella rubella
Carub.0003s1719 10.0kb downstream 10.0kb downstream 11815 true scaffold_3: 6082954-6094768 Capsella rubella
Carub.0003s1719 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6082954-6092953 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041501 5273 Angiosperm View MSA
122366871 5261 Brassicaceae View MSA
123827405 5264 Brassicales-Malvales View MSA
124339990 5266 SBM View MSA
124240515 5268 Malvidae View MSA
124071228 5270 Rosid View MSA
123739154 5271 Pentapetalae View MSA
122789035 5272 Eudicot View MSA
121347550 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain