Gene : Carub.0003s1773 C. rubella v1.1
Defline:  (1 of 29) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1773
Name:  ? Carub.0003s1773 Secondary Identifier:  ? PAC:39242372
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1773 0.5kb upstream 0.5kb upstream 2564 true scaffold_3: 6282558-6285121 Capsella rubella
Carub.0003s1773 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6282558-6283057 Capsella rubella
Carub.0003s1773 0.5kb downstream 0.5kb downstream 2564 true scaffold_3: 6283058-6285621 Capsella rubella
Carub.0003s1773 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6285122-6285621 Capsella rubella
Carub.0003s1773 1.0kb upstream 1.0kb upstream 3064 true scaffold_3: 6282058-6285121 Capsella rubella
Carub.0003s1773 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6282058-6283057 Capsella rubella
Carub.0003s1773 1.0kb downstream 1.0kb downstream 3064 true scaffold_3: 6283058-6286121 Capsella rubella
Carub.0003s1773 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6285122-6286121 Capsella rubella
Carub.0003s1773 2.0kb upstream 2.0kb upstream 4064 true scaffold_3: 6281058-6285121 Capsella rubella
Carub.0003s1773 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6281058-6283057 Capsella rubella
Carub.0003s1773 2.0kb downstream 2.0kb downstream 4064 true scaffold_3: 6283058-6287121 Capsella rubella
Carub.0003s1773 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6285122-6287121 Capsella rubella
Carub.0003s1773 5.0kb upstream 5.0kb upstream 7064 true scaffold_3: 6278058-6285121 Capsella rubella
Carub.0003s1773 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6278058-6283057 Capsella rubella
Carub.0003s1773 5.0kb downstream 5.0kb downstream 7064 true scaffold_3: 6283058-6290121 Capsella rubella
Carub.0003s1773 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6285122-6290121 Capsella rubella
Carub.0003s1773 10.0kb upstream 10.0kb upstream 12064 true scaffold_3: 6273058-6285121 Capsella rubella
Carub.0003s1773 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6273058-6283057 Capsella rubella
Carub.0003s1773 10.0kb downstream 10.0kb downstream 12064 true scaffold_3: 6283058-6295121 Capsella rubella
Carub.0003s1773 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6285122-6295121 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370066 5261 Brassicaceae View MSA
123833308 5264 Brassicales-Malvales View MSA
124339952 5266 SBM View MSA
124237059 5268 Malvidae View MSA
124068854 5270 Rosid View MSA
123739048 5271 Pentapetalae View MSA
122788284 5272 Eudicot View MSA
122041778 5273 Angiosperm View MSA
121309888 5274 Embryophyte View MSA
123347524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain