Gene : Carub.0003s1867 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1867
Name:  ? Carub.0003s1867 Secondary Identifier:  ? PAC:39240480
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1867 0.5kb upstream 0.5kb upstream 2787 true scaffold_3: 6628952-6631738 Capsella rubella
Carub.0003s1867 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6628952-6629451 Capsella rubella
Carub.0003s1867 0.5kb downstream 0.5kb downstream 2787 true scaffold_3: 6629452-6632238 Capsella rubella
Carub.0003s1867 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6631739-6632238 Capsella rubella
Carub.0003s1867 1.0kb upstream 1.0kb upstream 3287 true scaffold_3: 6628452-6631738 Capsella rubella
Carub.0003s1867 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6628452-6629451 Capsella rubella
Carub.0003s1867 1.0kb downstream 1.0kb downstream 3287 true scaffold_3: 6629452-6632738 Capsella rubella
Carub.0003s1867 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6631739-6632738 Capsella rubella
Carub.0003s1867 2.0kb upstream 2.0kb upstream 4287 true scaffold_3: 6627452-6631738 Capsella rubella
Carub.0003s1867 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6627452-6629451 Capsella rubella
Carub.0003s1867 2.0kb downstream 2.0kb downstream 4287 true scaffold_3: 6629452-6633738 Capsella rubella
Carub.0003s1867 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6631739-6633738 Capsella rubella
Carub.0003s1867 5.0kb upstream 5.0kb upstream 7287 true scaffold_3: 6624452-6631738 Capsella rubella
Carub.0003s1867 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6624452-6629451 Capsella rubella
Carub.0003s1867 5.0kb downstream 5.0kb downstream 7287 true scaffold_3: 6629452-6636738 Capsella rubella
Carub.0003s1867 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6631739-6636738 Capsella rubella
Carub.0003s1867 10.0kb upstream 10.0kb upstream 12287 true scaffold_3: 6619452-6631738 Capsella rubella
Carub.0003s1867 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6619452-6629451 Capsella rubella
Carub.0003s1867 10.0kb downstream 10.0kb downstream 12287 true scaffold_3: 6629452-6641738 Capsella rubella
Carub.0003s1867 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6631739-6641738 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373499 5261 Brassicaceae View MSA
123835509 5264 Brassicales-Malvales View MSA
124346604 5266 SBM View MSA
124245195 5268 Malvidae View MSA
124063386 5270 Rosid View MSA
123751448 5271 Pentapetalae View MSA
122786309 5272 Eudicot View MSA
122045873 5273 Angiosperm View MSA
121310522 5274 Embryophyte View MSA
123347983 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain