Gene : Carub.0003s1831 C. rubella v1.1
Defline:  (1 of 1) PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 Genomic Order:  1831
Name:  ? Carub.0003s1831 Secondary Identifier:  ? PAC:39240521
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1831 0.5kb upstream 0.5kb upstream 4593 true scaffold_3: 6486961-6491553 Capsella rubella
Carub.0003s1831 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6486961-6487460 Capsella rubella
Carub.0003s1831 0.5kb downstream 0.5kb downstream 4593 true scaffold_3: 6487461-6492053 Capsella rubella
Carub.0003s1831 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6491554-6492053 Capsella rubella
Carub.0003s1831 1.0kb upstream 1.0kb upstream 5093 true scaffold_3: 6486461-6491553 Capsella rubella
Carub.0003s1831 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6486461-6487460 Capsella rubella
Carub.0003s1831 1.0kb downstream 1.0kb downstream 5093 true scaffold_3: 6487461-6492553 Capsella rubella
Carub.0003s1831 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6491554-6492553 Capsella rubella
Carub.0003s1831 2.0kb upstream 2.0kb upstream 6093 true scaffold_3: 6485461-6491553 Capsella rubella
Carub.0003s1831 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6485461-6487460 Capsella rubella
Carub.0003s1831 2.0kb downstream 2.0kb downstream 6093 true scaffold_3: 6487461-6493553 Capsella rubella
Carub.0003s1831 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6491554-6493553 Capsella rubella
Carub.0003s1831 5.0kb upstream 5.0kb upstream 9093 true scaffold_3: 6482461-6491553 Capsella rubella
Carub.0003s1831 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6482461-6487460 Capsella rubella
Carub.0003s1831 5.0kb downstream 5.0kb downstream 9093 true scaffold_3: 6487461-6496553 Capsella rubella
Carub.0003s1831 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6491554-6496553 Capsella rubella
Carub.0003s1831 10.0kb upstream 10.0kb upstream 14093 true scaffold_3: 6477461-6491553 Capsella rubella
Carub.0003s1831 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6477461-6487460 Capsella rubella
Carub.0003s1831 10.0kb downstream 10.0kb downstream 14093 true scaffold_3: 6487461-6501553 Capsella rubella
Carub.0003s1831 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6491554-6501553 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363743 5261 Brassicaceae View MSA
123828744 5264 Brassicales-Malvales View MSA
124341729 5266 SBM View MSA
124237775 5268 Malvidae View MSA
124065591 5270 Rosid View MSA
123741307 5271 Pentapetalae View MSA
122792610 5272 Eudicot View MSA
122044856 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain