Gene : Carub.0003s1669 C. rubella v1.1
Defline:  (1 of 2) PTHR23335//PTHR23335:SF3 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA // CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 5-RELATED Genomic Order:  1669
Name:  ? Carub.0003s1669 Secondary Identifier:  ? PAC:39242896
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1669 0.5kb upstream 0.5kb upstream 5367 true scaffold_3: 5910931-5916297 Capsella rubella
Carub.0003s1669 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5910931-5911430 Capsella rubella
Carub.0003s1669 0.5kb downstream 0.5kb downstream 5367 true scaffold_3: 5911431-5916797 Capsella rubella
Carub.0003s1669 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5916298-5916797 Capsella rubella
Carub.0003s1669 1.0kb upstream 1.0kb upstream 5867 true scaffold_3: 5910431-5916297 Capsella rubella
Carub.0003s1669 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5910431-5911430 Capsella rubella
Carub.0003s1669 1.0kb downstream 1.0kb downstream 5867 true scaffold_3: 5911431-5917297 Capsella rubella
Carub.0003s1669 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5916298-5917297 Capsella rubella
Carub.0003s1669 2.0kb upstream 2.0kb upstream 6867 true scaffold_3: 5909431-5916297 Capsella rubella
Carub.0003s1669 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5909431-5911430 Capsella rubella
Carub.0003s1669 2.0kb downstream 2.0kb downstream 6867 true scaffold_3: 5911431-5918297 Capsella rubella
Carub.0003s1669 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5916298-5918297 Capsella rubella
Carub.0003s1669 5.0kb upstream 5.0kb upstream 9867 true scaffold_3: 5906431-5916297 Capsella rubella
Carub.0003s1669 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5906431-5911430 Capsella rubella
Carub.0003s1669 5.0kb downstream 5.0kb downstream 9867 true scaffold_3: 5911431-5921297 Capsella rubella
Carub.0003s1669 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5916298-5921297 Capsella rubella
Carub.0003s1669 10.0kb upstream 10.0kb upstream 14867 true scaffold_3: 5901431-5916297 Capsella rubella
Carub.0003s1669 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5901431-5911430 Capsella rubella
Carub.0003s1669 10.0kb downstream 10.0kb downstream 14867 true scaffold_3: 5911431-5926297 Capsella rubella
Carub.0003s1669 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5916298-5926297 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360780 5261 Brassicaceae View MSA
123798024 5264 Brassicales-Malvales View MSA
124295712 5266 SBM View MSA
124250326 5268 Malvidae View MSA
124060879 5270 Rosid View MSA
123739187 5271 Pentapetalae View MSA
122787070 5272 Eudicot View MSA
122044952 5273 Angiosperm View MSA
121310369 5274 Embryophyte View MSA
123347871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain