Gene : Carub.0003s3552 C. rubella v1.1
Defline:  (1 of 3) 2.8.1.8 - Lipoyl synthase / Lipoate synthase Genomic Order:  3552
Name:  ? Carub.0003s3552 Secondary Identifier:  ? PAC:39239286
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-501 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3552 0.5kb upstream 0.5kb upstream 1889 true scaffold_3: 15005141-15007029 Capsella rubella
Carub.0003s3552 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 15005141-15005640 Capsella rubella
Carub.0003s3552 0.5kb downstream 0.5kb downstream 1889 true scaffold_3: 15005641-15007529 Capsella rubella
Carub.0003s3552 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 15007030-15007529 Capsella rubella
Carub.0003s3552 1.0kb upstream 1.0kb upstream 2389 true scaffold_3: 15004641-15007029 Capsella rubella
Carub.0003s3552 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 15004641-15005640 Capsella rubella
Carub.0003s3552 1.0kb downstream 1.0kb downstream 2389 true scaffold_3: 15005641-15008029 Capsella rubella
Carub.0003s3552 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 15007030-15008029 Capsella rubella
Carub.0003s3552 2.0kb upstream 2.0kb upstream 3389 true scaffold_3: 15003641-15007029 Capsella rubella
Carub.0003s3552 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 15003641-15005640 Capsella rubella
Carub.0003s3552 2.0kb downstream 2.0kb downstream 3389 true scaffold_3: 15005641-15009029 Capsella rubella
Carub.0003s3552 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 15007030-15009029 Capsella rubella
Carub.0003s3552 5.0kb upstream 5.0kb upstream 6389 true scaffold_3: 15000641-15007029 Capsella rubella
Carub.0003s3552 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 15000641-15005640 Capsella rubella
Carub.0003s3552 5.0kb downstream 5.0kb downstream 6389 true scaffold_3: 15005641-15012029 Capsella rubella
Carub.0003s3552 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 15007030-15012029 Capsella rubella
Carub.0003s3552 10.0kb upstream 10.0kb upstream 11389 true scaffold_3: 14995641-15007029 Capsella rubella
Carub.0003s3552 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14995641-15005640 Capsella rubella
Carub.0003s3552 10.0kb downstream 10.0kb downstream 11389 true scaffold_3: 15005641-15017029 Capsella rubella
Carub.0003s3552 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 15007030-15017029 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364546 5261 Brassicaceae View MSA
123828206 5264 Brassicales-Malvales View MSA
124340008 5266 SBM View MSA
124241256 5268 Malvidae View MSA
124060481 5270 Rosid View MSA
123740164 5271 Pentapetalae View MSA
122788424 5272 Eudicot View MSA
122045804 5273 Angiosperm View MSA
121345971 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain