Gene : Carub.0003s3545 C. rubella v1.1
Defline:  (1 of 2) PTHR34053//PTHR34053:SF1 - FAMILY NOT NAMED // PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  3545
Name:  ? Carub.0003s3545 Secondary Identifier:  ? PAC:39242923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3545 0.5kb upstream 0.5kb upstream 1893 true scaffold_3: 14967535-14969427 Capsella rubella
Carub.0003s3545 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14968928-14969427 Capsella rubella
Carub.0003s3545 0.5kb downstream 0.5kb downstream 1893 true scaffold_3: 14967035-14968927 Capsella rubella
Carub.0003s3545 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14967035-14967534 Capsella rubella
Carub.0003s3545 1.0kb upstream 1.0kb upstream 2393 true scaffold_3: 14967535-14969927 Capsella rubella
Carub.0003s3545 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14968928-14969927 Capsella rubella
Carub.0003s3545 1.0kb downstream 1.0kb downstream 2393 true scaffold_3: 14966535-14968927 Capsella rubella
Carub.0003s3545 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14966535-14967534 Capsella rubella
Carub.0003s3545 2.0kb upstream 2.0kb upstream 3393 true scaffold_3: 14967535-14970927 Capsella rubella
Carub.0003s3545 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14968928-14970927 Capsella rubella
Carub.0003s3545 2.0kb downstream 2.0kb downstream 3393 true scaffold_3: 14965535-14968927 Capsella rubella
Carub.0003s3545 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14965535-14967534 Capsella rubella
Carub.0003s3545 5.0kb upstream 5.0kb upstream 6393 true scaffold_3: 14967535-14973927 Capsella rubella
Carub.0003s3545 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14968928-14973927 Capsella rubella
Carub.0003s3545 5.0kb downstream 5.0kb downstream 6393 true scaffold_3: 14962535-14968927 Capsella rubella
Carub.0003s3545 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14962535-14967534 Capsella rubella
Carub.0003s3545 10.0kb upstream 10.0kb upstream 11393 true scaffold_3: 14967535-14978927 Capsella rubella
Carub.0003s3545 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14968928-14978927 Capsella rubella
Carub.0003s3545 10.0kb downstream 10.0kb downstream 11393 true scaffold_3: 14957535-14968927 Capsella rubella
Carub.0003s3545 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14957535-14967534 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360694 5261 Brassicaceae View MSA
123798009 5264 Brassicales-Malvales View MSA
124295697 5266 SBM View MSA
124248031 5268 Malvidae View MSA
124065655 5270 Rosid View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain