Gene : Carub.0003s3415 C. rubella v1.1
Defline:  (1 of 1) PTHR12726:SF0 - CERAMIDE GLUCOSYLTRANSFERASE Genomic Order:  3415
Name:  ? Carub.0003s3415 Secondary Identifier:  ? PAC:39241669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3415 0.5kb upstream 0.5kb upstream 4733 true scaffold_3: 14498194-14502926 Capsella rubella
Carub.0003s3415 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14498194-14498693 Capsella rubella
Carub.0003s3415 0.5kb downstream 0.5kb downstream 4733 true scaffold_3: 14498694-14503426 Capsella rubella
Carub.0003s3415 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14502927-14503426 Capsella rubella
Carub.0003s3415 1.0kb upstream 1.0kb upstream 5233 true scaffold_3: 14497694-14502926 Capsella rubella
Carub.0003s3415 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14497694-14498693 Capsella rubella
Carub.0003s3415 1.0kb downstream 1.0kb downstream 5233 true scaffold_3: 14498694-14503926 Capsella rubella
Carub.0003s3415 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14502927-14503926 Capsella rubella
Carub.0003s3415 2.0kb upstream 2.0kb upstream 6233 true scaffold_3: 14496694-14502926 Capsella rubella
Carub.0003s3415 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14496694-14498693 Capsella rubella
Carub.0003s3415 2.0kb downstream 2.0kb downstream 6233 true scaffold_3: 14498694-14504926 Capsella rubella
Carub.0003s3415 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14502927-14504926 Capsella rubella
Carub.0003s3415 5.0kb upstream 5.0kb upstream 9233 true scaffold_3: 14493694-14502926 Capsella rubella
Carub.0003s3415 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14493694-14498693 Capsella rubella
Carub.0003s3415 5.0kb downstream 5.0kb downstream 9233 true scaffold_3: 14498694-14507926 Capsella rubella
Carub.0003s3415 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14502927-14507926 Capsella rubella
Carub.0003s3415 10.0kb upstream 10.0kb upstream 14233 true scaffold_3: 14488694-14502926 Capsella rubella
Carub.0003s3415 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14488694-14498693 Capsella rubella
Carub.0003s3415 10.0kb downstream 10.0kb downstream 14233 true scaffold_3: 14498694-14512926 Capsella rubella
Carub.0003s3415 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14502927-14512926 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374447 5261 Brassicaceae View MSA
123836199 5264 Brassicales-Malvales View MSA
124345898 5266 SBM View MSA
124243153 5268 Malvidae View MSA
124067627 5270 Rosid View MSA
123748173 5271 Pentapetalae View MSA
122788226 5272 Eudicot View MSA
122045513 5273 Angiosperm View MSA
121350192 5274 Embryophyte View MSA
123426022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain