Gene : Carub.0003s3423 C. rubella v1.1
Defline:  (1 of 3) PTHR10334//PTHR10334:SF200 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3423
Name:  ? Carub.0003s3423 Secondary Identifier:  ? PAC:39241533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3423 0.5kb upstream 0.5kb upstream 1905 true scaffold_3: 14534263-14536167 Capsella rubella
Carub.0003s3423 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14535668-14536167 Capsella rubella
Carub.0003s3423 0.5kb downstream 0.5kb downstream 1905 true scaffold_3: 14533763-14535667 Capsella rubella
Carub.0003s3423 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14533763-14534262 Capsella rubella
Carub.0003s3423 1.0kb upstream 1.0kb upstream 2405 true scaffold_3: 14534263-14536667 Capsella rubella
Carub.0003s3423 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14535668-14536667 Capsella rubella
Carub.0003s3423 1.0kb downstream 1.0kb downstream 2405 true scaffold_3: 14533263-14535667 Capsella rubella
Carub.0003s3423 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14533263-14534262 Capsella rubella
Carub.0003s3423 2.0kb upstream 2.0kb upstream 3405 true scaffold_3: 14534263-14537667 Capsella rubella
Carub.0003s3423 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14535668-14537667 Capsella rubella
Carub.0003s3423 2.0kb downstream 2.0kb downstream 3405 true scaffold_3: 14532263-14535667 Capsella rubella
Carub.0003s3423 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14532263-14534262 Capsella rubella
Carub.0003s3423 5.0kb upstream 5.0kb upstream 6405 true scaffold_3: 14534263-14540667 Capsella rubella
Carub.0003s3423 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14535668-14540667 Capsella rubella
Carub.0003s3423 5.0kb downstream 5.0kb downstream 6405 true scaffold_3: 14529263-14535667 Capsella rubella
Carub.0003s3423 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14529263-14534262 Capsella rubella
Carub.0003s3423 10.0kb upstream 10.0kb upstream 11405 true scaffold_3: 14534263-14545667 Capsella rubella
Carub.0003s3423 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14535668-14545667 Capsella rubella
Carub.0003s3423 10.0kb downstream 10.0kb downstream 11405 true scaffold_3: 14524263-14535667 Capsella rubella
Carub.0003s3423 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14524263-14534262 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376229 5261 Brassicaceae View MSA
123838100 5264 Brassicales-Malvales View MSA
124351086 5266 SBM View MSA
124252549 5268 Malvidae View MSA
124074687 5270 Rosid View MSA
123753358 5271 Pentapetalae View MSA
122790752 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain