Gene : Carub.0003s3446 C. rubella v1.1
Defline:  (1 of 70) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  3446
Name:  ? Carub.0003s3446 Secondary Identifier:  ? PAC:39239300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3446 0.5kb upstream 0.5kb upstream 2978 true scaffold_3: 14647858-14650835 Capsella rubella
Carub.0003s3446 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14647858-14648357 Capsella rubella
Carub.0003s3446 0.5kb downstream 0.5kb downstream 2978 true scaffold_3: 14648358-14651335 Capsella rubella
Carub.0003s3446 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14650836-14651335 Capsella rubella
Carub.0003s3446 1.0kb upstream 1.0kb upstream 3478 true scaffold_3: 14647358-14650835 Capsella rubella
Carub.0003s3446 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14647358-14648357 Capsella rubella
Carub.0003s3446 1.0kb downstream 1.0kb downstream 3478 true scaffold_3: 14648358-14651835 Capsella rubella
Carub.0003s3446 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14650836-14651835 Capsella rubella
Carub.0003s3446 2.0kb upstream 2.0kb upstream 4478 true scaffold_3: 14646358-14650835 Capsella rubella
Carub.0003s3446 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14646358-14648357 Capsella rubella
Carub.0003s3446 2.0kb downstream 2.0kb downstream 4478 true scaffold_3: 14648358-14652835 Capsella rubella
Carub.0003s3446 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14650836-14652835 Capsella rubella
Carub.0003s3446 5.0kb upstream 5.0kb upstream 7478 true scaffold_3: 14643358-14650835 Capsella rubella
Carub.0003s3446 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14643358-14648357 Capsella rubella
Carub.0003s3446 5.0kb downstream 5.0kb downstream 7478 true scaffold_3: 14648358-14655835 Capsella rubella
Carub.0003s3446 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14650836-14655835 Capsella rubella
Carub.0003s3446 10.0kb upstream 10.0kb upstream 12478 true scaffold_3: 14638358-14650835 Capsella rubella
Carub.0003s3446 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14638358-14648357 Capsella rubella
Carub.0003s3446 10.0kb downstream 10.0kb downstream 12478 true scaffold_3: 14648358-14660835 Capsella rubella
Carub.0003s3446 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14650836-14660835 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375763 5261 Brassicaceae View MSA
123838351 5264 Brassicales-Malvales View MSA
124350658 5266 SBM View MSA
124181106 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain