Gene : Carub.0003s3460 C. rubella v1.1
Defline:  (1 of 2) PTHR10168//PTHR10168:SF14 - GLUTAREDOXIN // GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  3460
Name:  ? Carub.0003s3460 Secondary Identifier:  ? PAC:39242574
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3460 0.5kb upstream 0.5kb upstream 2252 true scaffold_3: 14698841-14701092 Capsella rubella
Carub.0003s3460 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14700593-14701092 Capsella rubella
Carub.0003s3460 0.5kb downstream 0.5kb downstream 2252 true scaffold_3: 14698341-14700592 Capsella rubella
Carub.0003s3460 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14698341-14698840 Capsella rubella
Carub.0003s3460 1.0kb upstream 1.0kb upstream 2752 true scaffold_3: 14698841-14701592 Capsella rubella
Carub.0003s3460 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14700593-14701592 Capsella rubella
Carub.0003s3460 1.0kb downstream 1.0kb downstream 2752 true scaffold_3: 14697841-14700592 Capsella rubella
Carub.0003s3460 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14697841-14698840 Capsella rubella
Carub.0003s3460 2.0kb upstream 2.0kb upstream 3752 true scaffold_3: 14698841-14702592 Capsella rubella
Carub.0003s3460 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14700593-14702592 Capsella rubella
Carub.0003s3460 2.0kb downstream 2.0kb downstream 3752 true scaffold_3: 14696841-14700592 Capsella rubella
Carub.0003s3460 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14696841-14698840 Capsella rubella
Carub.0003s3460 5.0kb upstream 5.0kb upstream 6752 true scaffold_3: 14698841-14705592 Capsella rubella
Carub.0003s3460 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14700593-14705592 Capsella rubella
Carub.0003s3460 5.0kb downstream 5.0kb downstream 6752 true scaffold_3: 14693841-14700592 Capsella rubella
Carub.0003s3460 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14693841-14698840 Capsella rubella
Carub.0003s3460 10.0kb upstream 10.0kb upstream 11752 true scaffold_3: 14698841-14710592 Capsella rubella
Carub.0003s3460 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14700593-14710592 Capsella rubella
Carub.0003s3460 10.0kb downstream 10.0kb downstream 11752 true scaffold_3: 14688841-14700592 Capsella rubella
Carub.0003s3460 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14688841-14698840 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122370271 5261 Brassicaceae View MSA
123799928 5264 Brassicales-Malvales View MSA
124297397 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain