Gene : Carub.0003s3483 C. rubella v1.1
Defline:  (1 of 2) PTHR22957:SF299 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  3483
Name:  ? Carub.0003s3483 Secondary Identifier:  ? PAC:39240771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3483 0.5kb upstream 0.5kb upstream 3475 true scaffold_3: 14801836-14805310 Capsella rubella
Carub.0003s3483 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14804811-14805310 Capsella rubella
Carub.0003s3483 0.5kb downstream 0.5kb downstream 3475 true scaffold_3: 14801336-14804810 Capsella rubella
Carub.0003s3483 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14801336-14801835 Capsella rubella
Carub.0003s3483 1.0kb upstream 1.0kb upstream 3975 true scaffold_3: 14801836-14805810 Capsella rubella
Carub.0003s3483 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14804811-14805810 Capsella rubella
Carub.0003s3483 1.0kb downstream 1.0kb downstream 3975 true scaffold_3: 14800836-14804810 Capsella rubella
Carub.0003s3483 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14800836-14801835 Capsella rubella
Carub.0003s3483 2.0kb upstream 2.0kb upstream 4975 true scaffold_3: 14801836-14806810 Capsella rubella
Carub.0003s3483 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14804811-14806810 Capsella rubella
Carub.0003s3483 2.0kb downstream 2.0kb downstream 4975 true scaffold_3: 14799836-14804810 Capsella rubella
Carub.0003s3483 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14799836-14801835 Capsella rubella
Carub.0003s3483 5.0kb upstream 5.0kb upstream 7975 true scaffold_3: 14801836-14809810 Capsella rubella
Carub.0003s3483 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14804811-14809810 Capsella rubella
Carub.0003s3483 5.0kb downstream 5.0kb downstream 7975 true scaffold_3: 14796836-14804810 Capsella rubella
Carub.0003s3483 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14796836-14801835 Capsella rubella
Carub.0003s3483 10.0kb upstream 10.0kb upstream 12975 true scaffold_3: 14801836-14814810 Capsella rubella
Carub.0003s3483 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14804811-14814810 Capsella rubella
Carub.0003s3483 10.0kb downstream 10.0kb downstream 12975 true scaffold_3: 14791836-14804810 Capsella rubella
Carub.0003s3483 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14791836-14801835 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381010 5261 Brassicaceae View MSA
123840738 5264 Brassicales-Malvales View MSA
124339091 5266 SBM View MSA
124238265 5268 Malvidae View MSA
124067717 5270 Rosid View MSA
123747965 5271 Pentapetalae View MSA
122785951 5272 Eudicot View MSA
122051014 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain