Gene : Carub.0003s3518 C. rubella v1.1
Defline:  (1 of 2) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  3518
Name:  ? Carub.0003s3518 Secondary Identifier:  ? PAC:39241097
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3518 0.5kb upstream 0.5kb upstream 2088 true scaffold_3: 14897106-14899193 Capsella rubella
Carub.0003s3518 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14898694-14899193 Capsella rubella
Carub.0003s3518 0.5kb downstream 0.5kb downstream 2088 true scaffold_3: 14896606-14898693 Capsella rubella
Carub.0003s3518 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14896606-14897105 Capsella rubella
Carub.0003s3518 1.0kb upstream 1.0kb upstream 2588 true scaffold_3: 14897106-14899693 Capsella rubella
Carub.0003s3518 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14898694-14899693 Capsella rubella
Carub.0003s3518 1.0kb downstream 1.0kb downstream 2588 true scaffold_3: 14896106-14898693 Capsella rubella
Carub.0003s3518 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14896106-14897105 Capsella rubella
Carub.0003s3518 2.0kb upstream 2.0kb upstream 3588 true scaffold_3: 14897106-14900693 Capsella rubella
Carub.0003s3518 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14898694-14900693 Capsella rubella
Carub.0003s3518 2.0kb downstream 2.0kb downstream 3588 true scaffold_3: 14895106-14898693 Capsella rubella
Carub.0003s3518 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14895106-14897105 Capsella rubella
Carub.0003s3518 5.0kb upstream 5.0kb upstream 6588 true scaffold_3: 14897106-14903693 Capsella rubella
Carub.0003s3518 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14898694-14903693 Capsella rubella
Carub.0003s3518 5.0kb downstream 5.0kb downstream 6588 true scaffold_3: 14892106-14898693 Capsella rubella
Carub.0003s3518 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14892106-14897105 Capsella rubella
Carub.0003s3518 10.0kb upstream 10.0kb upstream 11588 true scaffold_3: 14897106-14908693 Capsella rubella
Carub.0003s3518 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14898694-14908693 Capsella rubella
Carub.0003s3518 10.0kb downstream 10.0kb downstream 11588 true scaffold_3: 14887106-14898693 Capsella rubella
Carub.0003s3518 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14887106-14897105 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362464 5261 Brassicaceae View MSA
123836127 5264 Brassicales-Malvales View MSA
124340947 5266 SBM View MSA
124246421 5268 Malvidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain