Gene : Carub.0003s3292 C. rubella v1.1
Defline:  (1 of 1) PTHR22595//PTHR22595:SF33 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3292
Name:  ? Carub.0003s3292 Secondary Identifier:  ? PAC:39242544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3292 0.5kb upstream 0.5kb upstream 1302 true scaffold_3: 13936988-13938289 Capsella rubella
Carub.0003s3292 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13937790-13938289 Capsella rubella
Carub.0003s3292 0.5kb downstream 0.5kb downstream 1302 true scaffold_3: 13936488-13937789 Capsella rubella
Carub.0003s3292 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13936488-13936987 Capsella rubella
Carub.0003s3292 1.0kb upstream 1.0kb upstream 1802 true scaffold_3: 13936988-13938789 Capsella rubella
Carub.0003s3292 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13937790-13938789 Capsella rubella
Carub.0003s3292 1.0kb downstream 1.0kb downstream 1802 true scaffold_3: 13935988-13937789 Capsella rubella
Carub.0003s3292 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13935988-13936987 Capsella rubella
Carub.0003s3292 2.0kb upstream 2.0kb upstream 2802 true scaffold_3: 13936988-13939789 Capsella rubella
Carub.0003s3292 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13937790-13939789 Capsella rubella
Carub.0003s3292 2.0kb downstream 2.0kb downstream 2802 true scaffold_3: 13934988-13937789 Capsella rubella
Carub.0003s3292 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13934988-13936987 Capsella rubella
Carub.0003s3292 5.0kb upstream 5.0kb upstream 5802 true scaffold_3: 13936988-13942789 Capsella rubella
Carub.0003s3292 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13937790-13942789 Capsella rubella
Carub.0003s3292 5.0kb downstream 5.0kb downstream 5802 true scaffold_3: 13931988-13937789 Capsella rubella
Carub.0003s3292 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13931988-13936987 Capsella rubella
Carub.0003s3292 10.0kb upstream 10.0kb upstream 10802 true scaffold_3: 13936988-13947789 Capsella rubella
Carub.0003s3292 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13937790-13947789 Capsella rubella
Carub.0003s3292 10.0kb downstream 10.0kb downstream 10802 true scaffold_3: 13926988-13937789 Capsella rubella
Carub.0003s3292 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13926988-13936987 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368775 5261 Brassicaceae View MSA
123836749 5264 Brassicales-Malvales View MSA
124346757 5266 SBM View MSA
124249870 5268 Malvidae View MSA
124072622 5270 Rosid View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain