Gene : Carub.0003s3296 C. rubella v1.1
Defline:  (1 of 3) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  3296
Name:  ? Carub.0003s3296 Secondary Identifier:  ? PAC:39239246
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3296 0.5kb upstream 0.5kb upstream 1487 true scaffold_3: 13944203-13945689 Capsella rubella
Carub.0003s3296 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13944203-13944702 Capsella rubella
Carub.0003s3296 0.5kb downstream 0.5kb downstream 1487 true scaffold_3: 13944703-13946189 Capsella rubella
Carub.0003s3296 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13945690-13946189 Capsella rubella
Carub.0003s3296 1.0kb upstream 1.0kb upstream 1987 true scaffold_3: 13943703-13945689 Capsella rubella
Carub.0003s3296 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13943703-13944702 Capsella rubella
Carub.0003s3296 1.0kb downstream 1.0kb downstream 1987 true scaffold_3: 13944703-13946689 Capsella rubella
Carub.0003s3296 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13945690-13946689 Capsella rubella
Carub.0003s3296 2.0kb upstream 2.0kb upstream 2987 true scaffold_3: 13942703-13945689 Capsella rubella
Carub.0003s3296 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13942703-13944702 Capsella rubella
Carub.0003s3296 2.0kb downstream 2.0kb downstream 2987 true scaffold_3: 13944703-13947689 Capsella rubella
Carub.0003s3296 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13945690-13947689 Capsella rubella
Carub.0003s3296 5.0kb upstream 5.0kb upstream 5987 true scaffold_3: 13939703-13945689 Capsella rubella
Carub.0003s3296 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13939703-13944702 Capsella rubella
Carub.0003s3296 5.0kb downstream 5.0kb downstream 5987 true scaffold_3: 13944703-13950689 Capsella rubella
Carub.0003s3296 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13945690-13950689 Capsella rubella
Carub.0003s3296 10.0kb upstream 10.0kb upstream 10987 true scaffold_3: 13934703-13945689 Capsella rubella
Carub.0003s3296 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13934703-13944702 Capsella rubella
Carub.0003s3296 10.0kb downstream 10.0kb downstream 10987 true scaffold_3: 13944703-13955689 Capsella rubella
Carub.0003s3296 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13945690-13955689 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378206 5261 Brassicaceae View MSA
123834577 5264 Brassicales-Malvales View MSA
124344793 5266 SBM View MSA
124252340 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain