Gene : Carub.0003s3294 C. rubella v1.1
Defline:  (1 of 3) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  3294
Name:  ? Carub.0003s3294 Secondary Identifier:  ? PAC:39241359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3294 0.5kb upstream 0.5kb upstream 1511 true scaffold_3: 13941112-13942622 Capsella rubella
Carub.0003s3294 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13941112-13941611 Capsella rubella
Carub.0003s3294 0.5kb downstream 0.5kb downstream 1511 true scaffold_3: 13941612-13943122 Capsella rubella
Carub.0003s3294 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13942623-13943122 Capsella rubella
Carub.0003s3294 1.0kb upstream 1.0kb upstream 2011 true scaffold_3: 13940612-13942622 Capsella rubella
Carub.0003s3294 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13940612-13941611 Capsella rubella
Carub.0003s3294 1.0kb downstream 1.0kb downstream 2011 true scaffold_3: 13941612-13943622 Capsella rubella
Carub.0003s3294 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13942623-13943622 Capsella rubella
Carub.0003s3294 2.0kb upstream 2.0kb upstream 3011 true scaffold_3: 13939612-13942622 Capsella rubella
Carub.0003s3294 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13939612-13941611 Capsella rubella
Carub.0003s3294 2.0kb downstream 2.0kb downstream 3011 true scaffold_3: 13941612-13944622 Capsella rubella
Carub.0003s3294 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13942623-13944622 Capsella rubella
Carub.0003s3294 5.0kb upstream 5.0kb upstream 6011 true scaffold_3: 13936612-13942622 Capsella rubella
Carub.0003s3294 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13936612-13941611 Capsella rubella
Carub.0003s3294 5.0kb downstream 5.0kb downstream 6011 true scaffold_3: 13941612-13947622 Capsella rubella
Carub.0003s3294 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13942623-13947622 Capsella rubella
Carub.0003s3294 10.0kb upstream 10.0kb upstream 11011 true scaffold_3: 13931612-13942622 Capsella rubella
Carub.0003s3294 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13931612-13941611 Capsella rubella
Carub.0003s3294 10.0kb downstream 10.0kb downstream 11011 true scaffold_3: 13941612-13952622 Capsella rubella
Carub.0003s3294 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13942623-13952622 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378206 5261 Brassicaceae View MSA
123834577 5264 Brassicales-Malvales View MSA
124344793 5266 SBM View MSA
124252340 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain