Gene : Carub.0003s3307 C. rubella v1.1
Defline:  (1 of 2) PTHR21236//PTHR21236:SF9 - GOLGI MEMBRANE PROTEIN YIP1 // SUBFAMILY NOT NAMED Genomic Order:  3307
Name:  ? Carub.0003s3307 Secondary Identifier:  ? PAC:39241874
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3307 0.5kb upstream 0.5kb upstream 2363 true scaffold_3: 14005711-14008073 Capsella rubella
Carub.0003s3307 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14005711-14006210 Capsella rubella
Carub.0003s3307 0.5kb downstream 0.5kb downstream 2363 true scaffold_3: 14006211-14008573 Capsella rubella
Carub.0003s3307 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14008074-14008573 Capsella rubella
Carub.0003s3307 1.0kb upstream 1.0kb upstream 2863 true scaffold_3: 14005211-14008073 Capsella rubella
Carub.0003s3307 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14005211-14006210 Capsella rubella
Carub.0003s3307 1.0kb downstream 1.0kb downstream 2863 true scaffold_3: 14006211-14009073 Capsella rubella
Carub.0003s3307 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14008074-14009073 Capsella rubella
Carub.0003s3307 2.0kb upstream 2.0kb upstream 3863 true scaffold_3: 14004211-14008073 Capsella rubella
Carub.0003s3307 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14004211-14006210 Capsella rubella
Carub.0003s3307 2.0kb downstream 2.0kb downstream 3863 true scaffold_3: 14006211-14010073 Capsella rubella
Carub.0003s3307 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14008074-14010073 Capsella rubella
Carub.0003s3307 5.0kb upstream 5.0kb upstream 6863 true scaffold_3: 14001211-14008073 Capsella rubella
Carub.0003s3307 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14001211-14006210 Capsella rubella
Carub.0003s3307 5.0kb downstream 5.0kb downstream 6863 true scaffold_3: 14006211-14013073 Capsella rubella
Carub.0003s3307 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14008074-14013073 Capsella rubella
Carub.0003s3307 10.0kb upstream 10.0kb upstream 11863 true scaffold_3: 13996211-14008073 Capsella rubella
Carub.0003s3307 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13996211-14006210 Capsella rubella
Carub.0003s3307 10.0kb downstream 10.0kb downstream 11863 true scaffold_3: 14006211-14018073 Capsella rubella
Carub.0003s3307 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14008074-14018073 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343473 5261 Brassicaceae View MSA
123841285 5264 Brassicales-Malvales View MSA
124338755 5266 SBM View MSA
124241484 5268 Malvidae View MSA
124062311 5270 Rosid View MSA
123737556 5271 Pentapetalae View MSA
122791123 5272 Eudicot View MSA
122046860 5273 Angiosperm View MSA
121349329 5274 Embryophyte View MSA
123428190 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain