Gene : Carub.0003s3325 C. rubella v1.1
Defline:  (1 of 9) PTHR11945//PTHR11945:SF240 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN-RELATED Genomic Order:  3325
Name:  ? Carub.0003s3325 Secondary Identifier:  ? PAC:39239528
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3325 0.5kb upstream 0.5kb upstream 1598 true scaffold_3: 14098405-14100002 Capsella rubella
Carub.0003s3325 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14098405-14098904 Capsella rubella
Carub.0003s3325 0.5kb downstream 0.5kb downstream 1598 true scaffold_3: 14098905-14100502 Capsella rubella
Carub.0003s3325 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14100003-14100502 Capsella rubella
Carub.0003s3325 1.0kb upstream 1.0kb upstream 2098 true scaffold_3: 14097905-14100002 Capsella rubella
Carub.0003s3325 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14097905-14098904 Capsella rubella
Carub.0003s3325 1.0kb downstream 1.0kb downstream 2098 true scaffold_3: 14098905-14101002 Capsella rubella
Carub.0003s3325 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14100003-14101002 Capsella rubella
Carub.0003s3325 2.0kb upstream 2.0kb upstream 3098 true scaffold_3: 14096905-14100002 Capsella rubella
Carub.0003s3325 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14096905-14098904 Capsella rubella
Carub.0003s3325 2.0kb downstream 2.0kb downstream 3098 true scaffold_3: 14098905-14102002 Capsella rubella
Carub.0003s3325 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14100003-14102002 Capsella rubella
Carub.0003s3325 5.0kb upstream 5.0kb upstream 6098 true scaffold_3: 14093905-14100002 Capsella rubella
Carub.0003s3325 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14093905-14098904 Capsella rubella
Carub.0003s3325 5.0kb downstream 5.0kb downstream 6098 true scaffold_3: 14098905-14105002 Capsella rubella
Carub.0003s3325 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14100003-14105002 Capsella rubella
Carub.0003s3325 10.0kb upstream 10.0kb upstream 11098 true scaffold_3: 14088905-14100002 Capsella rubella
Carub.0003s3325 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14088905-14098904 Capsella rubella
Carub.0003s3325 10.0kb downstream 10.0kb downstream 11098 true scaffold_3: 14098905-14110002 Capsella rubella
Carub.0003s3325 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14100003-14110002 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381350 5261 Brassicaceae View MSA
123803198 5264 Brassicales-Malvales View MSA
124300324 5266 SBM View MSA
124252728 5268 Malvidae View MSA
124074162 5270 Rosid View MSA
123746234 5271 Pentapetalae View MSA
122797377 5272 Eudicot View MSA
122048647 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain