Gene : Carub.0003s3342 C. rubella v1.1
Defline:  (1 of 5) PTHR31042//PTHR31042:SF22 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  3342
Name:  ? Carub.0003s3342 Secondary Identifier:  ? PAC:39239893
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3342 0.5kb upstream 0.5kb upstream 5481 true scaffold_3: 14182148-14187628 Capsella rubella
Carub.0003s3342 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14182148-14182647 Capsella rubella
Carub.0003s3342 0.5kb downstream 0.5kb downstream 5481 true scaffold_3: 14182648-14188128 Capsella rubella
Carub.0003s3342 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14187629-14188128 Capsella rubella
Carub.0003s3342 1.0kb upstream 1.0kb upstream 5981 true scaffold_3: 14181648-14187628 Capsella rubella
Carub.0003s3342 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14181648-14182647 Capsella rubella
Carub.0003s3342 1.0kb downstream 1.0kb downstream 5981 true scaffold_3: 14182648-14188628 Capsella rubella
Carub.0003s3342 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14187629-14188628 Capsella rubella
Carub.0003s3342 2.0kb upstream 2.0kb upstream 6981 true scaffold_3: 14180648-14187628 Capsella rubella
Carub.0003s3342 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14180648-14182647 Capsella rubella
Carub.0003s3342 2.0kb downstream 2.0kb downstream 6981 true scaffold_3: 14182648-14189628 Capsella rubella
Carub.0003s3342 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14187629-14189628 Capsella rubella
Carub.0003s3342 5.0kb upstream 5.0kb upstream 9981 true scaffold_3: 14177648-14187628 Capsella rubella
Carub.0003s3342 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14177648-14182647 Capsella rubella
Carub.0003s3342 5.0kb downstream 5.0kb downstream 9981 true scaffold_3: 14182648-14192628 Capsella rubella
Carub.0003s3342 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14187629-14192628 Capsella rubella
Carub.0003s3342 10.0kb upstream 10.0kb upstream 14981 true scaffold_3: 14172648-14187628 Capsella rubella
Carub.0003s3342 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14172648-14182647 Capsella rubella
Carub.0003s3342 10.0kb downstream 10.0kb downstream 14981 true scaffold_3: 14182648-14197628 Capsella rubella
Carub.0003s3342 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14187629-14197628 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376005 5261 Brassicaceae View MSA
123837962 5264 Brassicales-Malvales View MSA
124337491 5266 SBM View MSA
124242421 5268 Malvidae View MSA
124069313 5270 Rosid View MSA
123745528 5271 Pentapetalae View MSA
122791834 5272 Eudicot View MSA
122045211 5273 Angiosperm View MSA
121345766 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain