Gene : Carub.0003s3391 C. rubella v1.1
Defline:  (1 of 3) PTHR11034//PTHR11034:SF23 - N-MYC DOWNSTREAM REGULATED // N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  3391
Name:  ? Carub.0003s3391 Secondary Identifier:  ? PAC:39242081
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3391 0.5kb upstream 0.5kb upstream 3488 true scaffold_3: 14377961-14381448 Capsella rubella
Carub.0003s3391 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14380949-14381448 Capsella rubella
Carub.0003s3391 0.5kb downstream 0.5kb downstream 3488 true scaffold_3: 14377461-14380948 Capsella rubella
Carub.0003s3391 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14377461-14377960 Capsella rubella
Carub.0003s3391 1.0kb upstream 1.0kb upstream 3988 true scaffold_3: 14377961-14381948 Capsella rubella
Carub.0003s3391 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14380949-14381948 Capsella rubella
Carub.0003s3391 1.0kb downstream 1.0kb downstream 3988 true scaffold_3: 14376961-14380948 Capsella rubella
Carub.0003s3391 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14376961-14377960 Capsella rubella
Carub.0003s3391 2.0kb upstream 2.0kb upstream 4988 true scaffold_3: 14377961-14382948 Capsella rubella
Carub.0003s3391 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14380949-14382948 Capsella rubella
Carub.0003s3391 2.0kb downstream 2.0kb downstream 4988 true scaffold_3: 14375961-14380948 Capsella rubella
Carub.0003s3391 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14375961-14377960 Capsella rubella
Carub.0003s3391 5.0kb upstream 5.0kb upstream 7988 true scaffold_3: 14377961-14385948 Capsella rubella
Carub.0003s3391 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14380949-14385948 Capsella rubella
Carub.0003s3391 5.0kb downstream 5.0kb downstream 7988 true scaffold_3: 14372961-14380948 Capsella rubella
Carub.0003s3391 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14372961-14377960 Capsella rubella
Carub.0003s3391 10.0kb upstream 10.0kb upstream 12988 true scaffold_3: 14377961-14390948 Capsella rubella
Carub.0003s3391 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14380949-14390948 Capsella rubella
Carub.0003s3391 10.0kb downstream 10.0kb downstream 12988 true scaffold_3: 14367961-14380948 Capsella rubella
Carub.0003s3391 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14367961-14377960 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373206 5261 Brassicaceae View MSA
123839295 5264 Brassicales-Malvales View MSA
124342138 5266 SBM View MSA
124248646 5268 Malvidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain