Gene : Carub.0003s2954 C. rubella v1.1
Defline:  (1 of 1) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2954
Name:  ? Carub.0003s2954 Secondary Identifier:  ? PAC:39239707
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2954 0.5kb upstream 0.5kb upstream 1064 true scaffold_3: 12447674-12448737 Capsella rubella
Carub.0003s2954 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12447674-12448173 Capsella rubella
Carub.0003s2954 0.5kb downstream 0.5kb downstream 1064 true scaffold_3: 12448174-12449237 Capsella rubella
Carub.0003s2954 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12448738-12449237 Capsella rubella
Carub.0003s2954 1.0kb upstream 1.0kb upstream 1564 true scaffold_3: 12447174-12448737 Capsella rubella
Carub.0003s2954 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12447174-12448173 Capsella rubella
Carub.0003s2954 1.0kb downstream 1.0kb downstream 1564 true scaffold_3: 12448174-12449737 Capsella rubella
Carub.0003s2954 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12448738-12449737 Capsella rubella
Carub.0003s2954 2.0kb upstream 2.0kb upstream 2564 true scaffold_3: 12446174-12448737 Capsella rubella
Carub.0003s2954 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12446174-12448173 Capsella rubella
Carub.0003s2954 2.0kb downstream 2.0kb downstream 2564 true scaffold_3: 12448174-12450737 Capsella rubella
Carub.0003s2954 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12448738-12450737 Capsella rubella
Carub.0003s2954 5.0kb upstream 5.0kb upstream 5564 true scaffold_3: 12443174-12448737 Capsella rubella
Carub.0003s2954 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12443174-12448173 Capsella rubella
Carub.0003s2954 5.0kb downstream 5.0kb downstream 5564 true scaffold_3: 12448174-12453737 Capsella rubella
Carub.0003s2954 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12448738-12453737 Capsella rubella
Carub.0003s2954 10.0kb upstream 10.0kb upstream 10564 true scaffold_3: 12438174-12448737 Capsella rubella
Carub.0003s2954 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12438174-12448173 Capsella rubella
Carub.0003s2954 10.0kb downstream 10.0kb downstream 10564 true scaffold_3: 12448174-12458737 Capsella rubella
Carub.0003s2954 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12448738-12458737 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369412 5261 Brassicaceae View MSA
123836714 5264 Brassicales-Malvales View MSA
124349176 5266 SBM View MSA
124254237 5268 Malvidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain