Gene : Carub.0003s3050 C. rubella v1.1
Defline:  (1 of 3) PTHR31356//PTHR31356:SF9 - FAMILY NOT NAMED // L-ASCORBATE PEROXIDASE 3, PEROXISOMAL Genomic Order:  3050
Name:  ? Carub.0003s3050 Secondary Identifier:  ? PAC:39241976
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2261 Capsella rubella pathologic  
Crubella PWY-6959 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3050 0.5kb upstream 0.5kb upstream 2974 true scaffold_3: 12914578-12917551 Capsella rubella
Carub.0003s3050 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12914578-12915077 Capsella rubella
Carub.0003s3050 0.5kb downstream 0.5kb downstream 2974 true scaffold_3: 12915078-12918051 Capsella rubella
Carub.0003s3050 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12917552-12918051 Capsella rubella
Carub.0003s3050 1.0kb upstream 1.0kb upstream 3474 true scaffold_3: 12914078-12917551 Capsella rubella
Carub.0003s3050 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12914078-12915077 Capsella rubella
Carub.0003s3050 1.0kb downstream 1.0kb downstream 3474 true scaffold_3: 12915078-12918551 Capsella rubella
Carub.0003s3050 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12917552-12918551 Capsella rubella
Carub.0003s3050 2.0kb upstream 2.0kb upstream 4474 true scaffold_3: 12913078-12917551 Capsella rubella
Carub.0003s3050 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12913078-12915077 Capsella rubella
Carub.0003s3050 2.0kb downstream 2.0kb downstream 4474 true scaffold_3: 12915078-12919551 Capsella rubella
Carub.0003s3050 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12917552-12919551 Capsella rubella
Carub.0003s3050 5.0kb upstream 5.0kb upstream 7474 true scaffold_3: 12910078-12917551 Capsella rubella
Carub.0003s3050 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12910078-12915077 Capsella rubella
Carub.0003s3050 5.0kb downstream 5.0kb downstream 7474 true scaffold_3: 12915078-12922551 Capsella rubella
Carub.0003s3050 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12917552-12922551 Capsella rubella
Carub.0003s3050 10.0kb upstream 10.0kb upstream 12474 true scaffold_3: 12905078-12917551 Capsella rubella
Carub.0003s3050 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12905078-12915077 Capsella rubella
Carub.0003s3050 10.0kb downstream 10.0kb downstream 12474 true scaffold_3: 12915078-12927551 Capsella rubella
Carub.0003s3050 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12917552-12927551 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510196 5273 Angiosperm View MSA
122360435 5261 Brassicaceae View MSA
123797954 5264 Brassicales-Malvales View MSA
124295650 5266 SBM View MSA
124148027 5268 Malvidae View MSA
123874113 5270 Rosid View MSA
123458134 5271 Pentapetalae View MSA
122493545 5272 Eudicot View MSA
120783307 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain