Gene : Carub.0003s3068 C. rubella v1.1
Defline:  (1 of 4) 2.4.1.185 - Flavanone 7-O-beta-glucosyltransferase Genomic Order:  3068
Name:  ? Carub.0003s3068 Secondary Identifier:  ? PAC:39241655
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5094 Capsella rubella pathologic  
Crubella PWY-5105 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3068 0.5kb upstream 0.5kb upstream 2196 true scaffold_3: 13002430-13004625 Capsella rubella
Carub.0003s3068 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13002430-13002929 Capsella rubella
Carub.0003s3068 0.5kb downstream 0.5kb downstream 2196 true scaffold_3: 13002930-13005125 Capsella rubella
Carub.0003s3068 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13004626-13005125 Capsella rubella
Carub.0003s3068 1.0kb upstream 1.0kb upstream 2696 true scaffold_3: 13001930-13004625 Capsella rubella
Carub.0003s3068 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13001930-13002929 Capsella rubella
Carub.0003s3068 1.0kb downstream 1.0kb downstream 2696 true scaffold_3: 13002930-13005625 Capsella rubella
Carub.0003s3068 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13004626-13005625 Capsella rubella
Carub.0003s3068 2.0kb upstream 2.0kb upstream 3696 true scaffold_3: 13000930-13004625 Capsella rubella
Carub.0003s3068 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13000930-13002929 Capsella rubella
Carub.0003s3068 2.0kb downstream 2.0kb downstream 3696 true scaffold_3: 13002930-13006625 Capsella rubella
Carub.0003s3068 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13004626-13006625 Capsella rubella
Carub.0003s3068 5.0kb upstream 5.0kb upstream 6696 true scaffold_3: 12997930-13004625 Capsella rubella
Carub.0003s3068 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12997930-13002929 Capsella rubella
Carub.0003s3068 5.0kb downstream 5.0kb downstream 6696 true scaffold_3: 13002930-13009625 Capsella rubella
Carub.0003s3068 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13004626-13009625 Capsella rubella
Carub.0003s3068 10.0kb upstream 10.0kb upstream 11696 true scaffold_3: 12992930-13004625 Capsella rubella
Carub.0003s3068 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12992930-13002929 Capsella rubella
Carub.0003s3068 10.0kb downstream 10.0kb downstream 11696 true scaffold_3: 13002930-13014625 Capsella rubella
Carub.0003s3068 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13004626-13014625 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369032 5261 Brassicaceae View MSA
123841672 5264 Brassicales-Malvales View MSA
124346707 5266 SBM View MSA
124244822 5268 Malvidae View MSA
124061454 5270 Rosid View MSA
123745645 5271 Pentapetalae View MSA
122796365 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain