Gene : Carub.0003s3088 C. rubella v1.1
Defline:  (1 of 3) PTHR31618//PTHR31618:SF1 - FAMILY NOT NAMED // MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  3088
Name:  ? Carub.0003s3088 Secondary Identifier:  ? PAC:39242111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3088 0.5kb upstream 0.5kb upstream 3602 true scaffold_3: 13119798-13123399 Capsella rubella
Carub.0003s3088 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13122900-13123399 Capsella rubella
Carub.0003s3088 0.5kb downstream 0.5kb downstream 3602 true scaffold_3: 13119298-13122899 Capsella rubella
Carub.0003s3088 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13119298-13119797 Capsella rubella
Carub.0003s3088 1.0kb upstream 1.0kb upstream 4102 true scaffold_3: 13119798-13123899 Capsella rubella
Carub.0003s3088 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13122900-13123899 Capsella rubella
Carub.0003s3088 1.0kb downstream 1.0kb downstream 4102 true scaffold_3: 13118798-13122899 Capsella rubella
Carub.0003s3088 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13118798-13119797 Capsella rubella
Carub.0003s3088 2.0kb upstream 2.0kb upstream 5102 true scaffold_3: 13119798-13124899 Capsella rubella
Carub.0003s3088 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13122900-13124899 Capsella rubella
Carub.0003s3088 2.0kb downstream 2.0kb downstream 5102 true scaffold_3: 13117798-13122899 Capsella rubella
Carub.0003s3088 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13117798-13119797 Capsella rubella
Carub.0003s3088 5.0kb upstream 5.0kb upstream 8102 true scaffold_3: 13119798-13127899 Capsella rubella
Carub.0003s3088 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13122900-13127899 Capsella rubella
Carub.0003s3088 5.0kb downstream 5.0kb downstream 8102 true scaffold_3: 13114798-13122899 Capsella rubella
Carub.0003s3088 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13114798-13119797 Capsella rubella
Carub.0003s3088 10.0kb upstream 10.0kb upstream 13102 true scaffold_3: 13119798-13132899 Capsella rubella
Carub.0003s3088 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13122900-13132899 Capsella rubella
Carub.0003s3088 10.0kb downstream 10.0kb downstream 13102 true scaffold_3: 13109798-13122899 Capsella rubella
Carub.0003s3088 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13109798-13119797 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361465 5261 Brassicaceae View MSA
123798180 5264 Brassicales-Malvales View MSA
124350022 5266 SBM View MSA
124245082 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain