Gene : Carub.0003s3145 C. rubella v1.1
Defline:  (1 of 1) PF00011//PF01388 - Hsp20/alpha crystallin family (HSP20) // ARID/BRIGHT DNA binding domain (ARID) Genomic Order:  3145
Name:  ? Carub.0003s3145 Secondary Identifier:  ? PAC:39241502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3145 0.5kb upstream 0.5kb upstream 5276 true scaffold_3: 13330722-13335997 Capsella rubella
Carub.0003s3145 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13330722-13331221 Capsella rubella
Carub.0003s3145 0.5kb downstream 0.5kb downstream 5276 true scaffold_3: 13331222-13336497 Capsella rubella
Carub.0003s3145 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13335998-13336497 Capsella rubella
Carub.0003s3145 1.0kb upstream 1.0kb upstream 5776 true scaffold_3: 13330222-13335997 Capsella rubella
Carub.0003s3145 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13330222-13331221 Capsella rubella
Carub.0003s3145 1.0kb downstream 1.0kb downstream 5776 true scaffold_3: 13331222-13336997 Capsella rubella
Carub.0003s3145 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13335998-13336997 Capsella rubella
Carub.0003s3145 2.0kb upstream 2.0kb upstream 6776 true scaffold_3: 13329222-13335997 Capsella rubella
Carub.0003s3145 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13329222-13331221 Capsella rubella
Carub.0003s3145 2.0kb downstream 2.0kb downstream 6776 true scaffold_3: 13331222-13337997 Capsella rubella
Carub.0003s3145 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13335998-13337997 Capsella rubella
Carub.0003s3145 5.0kb upstream 5.0kb upstream 9776 true scaffold_3: 13326222-13335997 Capsella rubella
Carub.0003s3145 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13326222-13331221 Capsella rubella
Carub.0003s3145 5.0kb downstream 5.0kb downstream 9776 true scaffold_3: 13331222-13340997 Capsella rubella
Carub.0003s3145 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13335998-13340997 Capsella rubella
Carub.0003s3145 10.0kb upstream 10.0kb upstream 14776 true scaffold_3: 13321222-13335997 Capsella rubella
Carub.0003s3145 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13321222-13331221 Capsella rubella
Carub.0003s3145 10.0kb downstream 10.0kb downstream 14776 true scaffold_3: 13331222-13345997 Capsella rubella
Carub.0003s3145 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13335998-13345997 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360574 5261 Brassicaceae View MSA
123797980 5264 Brassicales-Malvales View MSA
124339179 5266 SBM View MSA
124250971 5268 Malvidae View MSA
124071452 5270 Rosid View MSA
123742990 5271 Pentapetalae View MSA
122787773 5272 Eudicot View MSA
122045434 5273 Angiosperm View MSA
121346901 5274 Embryophyte View MSA
123426327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain