Gene : Carub.0003s3162 C. rubella v1.1
Defline:  (1 of 2) PTHR24055:SF138 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  3162
Name:  ? Carub.0003s3162 Secondary Identifier:  ? PAC:39242017
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3162 0.5kb upstream 0.5kb upstream 3062 true scaffold_3: 13403962-13407023 Capsella rubella
Carub.0003s3162 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13403962-13404461 Capsella rubella
Carub.0003s3162 0.5kb downstream 0.5kb downstream 3062 true scaffold_3: 13404462-13407523 Capsella rubella
Carub.0003s3162 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13407024-13407523 Capsella rubella
Carub.0003s3162 1.0kb upstream 1.0kb upstream 3562 true scaffold_3: 13403462-13407023 Capsella rubella
Carub.0003s3162 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13403462-13404461 Capsella rubella
Carub.0003s3162 1.0kb downstream 1.0kb downstream 3562 true scaffold_3: 13404462-13408023 Capsella rubella
Carub.0003s3162 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13407024-13408023 Capsella rubella
Carub.0003s3162 2.0kb upstream 2.0kb upstream 4562 true scaffold_3: 13402462-13407023 Capsella rubella
Carub.0003s3162 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13402462-13404461 Capsella rubella
Carub.0003s3162 2.0kb downstream 2.0kb downstream 4562 true scaffold_3: 13404462-13409023 Capsella rubella
Carub.0003s3162 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13407024-13409023 Capsella rubella
Carub.0003s3162 5.0kb upstream 5.0kb upstream 7562 true scaffold_3: 13399462-13407023 Capsella rubella
Carub.0003s3162 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13399462-13404461 Capsella rubella
Carub.0003s3162 5.0kb downstream 5.0kb downstream 7562 true scaffold_3: 13404462-13412023 Capsella rubella
Carub.0003s3162 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13407024-13412023 Capsella rubella
Carub.0003s3162 10.0kb upstream 10.0kb upstream 12562 true scaffold_3: 13394462-13407023 Capsella rubella
Carub.0003s3162 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13394462-13404461 Capsella rubella
Carub.0003s3162 10.0kb downstream 10.0kb downstream 12562 true scaffold_3: 13404462-13417023 Capsella rubella
Carub.0003s3162 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13407024-13417023 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368953 5261 Brassicaceae View MSA
123840880 5264 Brassicales-Malvales View MSA
124343818 5266 SBM View MSA
124242743 5268 Malvidae View MSA
124072935 5270 Rosid View MSA
123747510 5271 Pentapetalae View MSA
122793634 5272 Eudicot View MSA
122041644 5273 Angiosperm View MSA
121350096 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain