Gene : Carub.0003s3168 C. rubella v1.1
Defline:  (1 of 77) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3168
Name:  ? Carub.0003s3168 Secondary Identifier:  ? PAC:39241144
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3168 0.5kb upstream 0.5kb upstream 2393 true scaffold_3: 13430291-13432683 Capsella rubella
Carub.0003s3168 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13432184-13432683 Capsella rubella
Carub.0003s3168 0.5kb downstream 0.5kb downstream 2393 true scaffold_3: 13429791-13432183 Capsella rubella
Carub.0003s3168 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13429791-13430290 Capsella rubella
Carub.0003s3168 1.0kb upstream 1.0kb upstream 2893 true scaffold_3: 13430291-13433183 Capsella rubella
Carub.0003s3168 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13432184-13433183 Capsella rubella
Carub.0003s3168 1.0kb downstream 1.0kb downstream 2893 true scaffold_3: 13429291-13432183 Capsella rubella
Carub.0003s3168 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13429291-13430290 Capsella rubella
Carub.0003s3168 2.0kb upstream 2.0kb upstream 3893 true scaffold_3: 13430291-13434183 Capsella rubella
Carub.0003s3168 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13432184-13434183 Capsella rubella
Carub.0003s3168 2.0kb downstream 2.0kb downstream 3893 true scaffold_3: 13428291-13432183 Capsella rubella
Carub.0003s3168 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13428291-13430290 Capsella rubella
Carub.0003s3168 5.0kb upstream 5.0kb upstream 6893 true scaffold_3: 13430291-13437183 Capsella rubella
Carub.0003s3168 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13432184-13437183 Capsella rubella
Carub.0003s3168 5.0kb downstream 5.0kb downstream 6893 true scaffold_3: 13425291-13432183 Capsella rubella
Carub.0003s3168 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13425291-13430290 Capsella rubella
Carub.0003s3168 10.0kb upstream 10.0kb upstream 11893 true scaffold_3: 13430291-13442183 Capsella rubella
Carub.0003s3168 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13432184-13442183 Capsella rubella
Carub.0003s3168 10.0kb downstream 10.0kb downstream 11893 true scaffold_3: 13420291-13432183 Capsella rubella
Carub.0003s3168 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13420291-13430290 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379482 5261 Brassicaceae View MSA
123802292 5264 Brassicales-Malvales View MSA
124299501 5266 SBM View MSA
124150897 5268 Malvidae View MSA
123876434 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain