Gene : Carub.0003s3196 C. rubella v1.1
Defline:  (1 of 1) PTHR24423//PTHR24423:SF436 - TWO-COMPONENT SENSOR HISTIDINE KINASE // HISTIDINE KINASE 1 Genomic Order:  3196
Name:  ? Carub.0003s3196 Secondary Identifier:  ? PAC:39242960
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3196 0.5kb upstream 0.5kb upstream 5705 true scaffold_3: 13530479-13536183 Capsella rubella
Carub.0003s3196 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13535684-13536183 Capsella rubella
Carub.0003s3196 0.5kb downstream 0.5kb downstream 5705 true scaffold_3: 13529979-13535683 Capsella rubella
Carub.0003s3196 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13529979-13530478 Capsella rubella
Carub.0003s3196 1.0kb upstream 1.0kb upstream 6205 true scaffold_3: 13530479-13536683 Capsella rubella
Carub.0003s3196 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13535684-13536683 Capsella rubella
Carub.0003s3196 1.0kb downstream 1.0kb downstream 6205 true scaffold_3: 13529479-13535683 Capsella rubella
Carub.0003s3196 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13529479-13530478 Capsella rubella
Carub.0003s3196 2.0kb upstream 2.0kb upstream 7205 true scaffold_3: 13530479-13537683 Capsella rubella
Carub.0003s3196 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13535684-13537683 Capsella rubella
Carub.0003s3196 2.0kb downstream 2.0kb downstream 7205 true scaffold_3: 13528479-13535683 Capsella rubella
Carub.0003s3196 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13528479-13530478 Capsella rubella
Carub.0003s3196 5.0kb upstream 5.0kb upstream 10205 true scaffold_3: 13530479-13540683 Capsella rubella
Carub.0003s3196 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13535684-13540683 Capsella rubella
Carub.0003s3196 5.0kb downstream 5.0kb downstream 10205 true scaffold_3: 13525479-13535683 Capsella rubella
Carub.0003s3196 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13525479-13530478 Capsella rubella
Carub.0003s3196 10.0kb upstream 10.0kb upstream 15205 true scaffold_3: 13530479-13545683 Capsella rubella
Carub.0003s3196 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13535684-13545683 Capsella rubella
Carub.0003s3196 10.0kb downstream 10.0kb downstream 15205 true scaffold_3: 13520479-13535683 Capsella rubella
Carub.0003s3196 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13520479-13530478 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372320 5261 Brassicaceae View MSA
123838383 5264 Brassicales-Malvales View MSA
124337495 5266 SBM View MSA
124242279 5268 Malvidae View MSA
124061360 5270 Rosid View MSA
123743331 5271 Pentapetalae View MSA
122796792 5272 Eudicot View MSA
122048751 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121348111 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain