Gene : Carub.0003s3230 C. rubella v1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3230
Name:  ? Carub.0003s3230 Secondary Identifier:  ? PAC:39239456
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3230 0.5kb upstream 0.5kb upstream 1317 true scaffold_3: 13673419-13674735 Capsella rubella
Carub.0003s3230 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13674236-13674735 Capsella rubella
Carub.0003s3230 0.5kb downstream 0.5kb downstream 1317 true scaffold_3: 13672919-13674235 Capsella rubella
Carub.0003s3230 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13672919-13673418 Capsella rubella
Carub.0003s3230 1.0kb upstream 1.0kb upstream 1817 true scaffold_3: 13673419-13675235 Capsella rubella
Carub.0003s3230 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13674236-13675235 Capsella rubella
Carub.0003s3230 1.0kb downstream 1.0kb downstream 1817 true scaffold_3: 13672419-13674235 Capsella rubella
Carub.0003s3230 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13672419-13673418 Capsella rubella
Carub.0003s3230 2.0kb upstream 2.0kb upstream 2817 true scaffold_3: 13673419-13676235 Capsella rubella
Carub.0003s3230 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13674236-13676235 Capsella rubella
Carub.0003s3230 2.0kb downstream 2.0kb downstream 2817 true scaffold_3: 13671419-13674235 Capsella rubella
Carub.0003s3230 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13671419-13673418 Capsella rubella
Carub.0003s3230 5.0kb upstream 5.0kb upstream 5817 true scaffold_3: 13673419-13679235 Capsella rubella
Carub.0003s3230 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13674236-13679235 Capsella rubella
Carub.0003s3230 5.0kb downstream 5.0kb downstream 5817 true scaffold_3: 13668419-13674235 Capsella rubella
Carub.0003s3230 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13668419-13673418 Capsella rubella
Carub.0003s3230 10.0kb upstream 10.0kb upstream 10817 true scaffold_3: 13673419-13684235 Capsella rubella
Carub.0003s3230 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13674236-13684235 Capsella rubella
Carub.0003s3230 10.0kb downstream 10.0kb downstream 10817 true scaffold_3: 13663419-13674235 Capsella rubella
Carub.0003s3230 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13663419-13673418 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370842 5261 Brassicaceae View MSA
123840095 5264 Brassicales-Malvales View MSA
124322679 5266 SBM View MSA
124248527 5268 Malvidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain