Gene : Carub.0003s3233 C. rubella v1.1
Defline:  (1 of 2) PTHR23324//PTHR23324:SF55 - SEC14 RELATED PROTEIN // PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED Genomic Order:  3233
Name:  ? Carub.0003s3233 Secondary Identifier:  ? PAC:39242242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3233 0.5kb upstream 0.5kb upstream 3288 true scaffold_3: 13684072-13687359 Capsella rubella
Carub.0003s3233 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13686860-13687359 Capsella rubella
Carub.0003s3233 0.5kb downstream 0.5kb downstream 3288 true scaffold_3: 13683572-13686859 Capsella rubella
Carub.0003s3233 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13683572-13684071 Capsella rubella
Carub.0003s3233 1.0kb upstream 1.0kb upstream 3788 true scaffold_3: 13684072-13687859 Capsella rubella
Carub.0003s3233 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13686860-13687859 Capsella rubella
Carub.0003s3233 1.0kb downstream 1.0kb downstream 3788 true scaffold_3: 13683072-13686859 Capsella rubella
Carub.0003s3233 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13683072-13684071 Capsella rubella
Carub.0003s3233 2.0kb upstream 2.0kb upstream 4788 true scaffold_3: 13684072-13688859 Capsella rubella
Carub.0003s3233 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13686860-13688859 Capsella rubella
Carub.0003s3233 2.0kb downstream 2.0kb downstream 4788 true scaffold_3: 13682072-13686859 Capsella rubella
Carub.0003s3233 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13682072-13684071 Capsella rubella
Carub.0003s3233 5.0kb upstream 5.0kb upstream 7788 true scaffold_3: 13684072-13691859 Capsella rubella
Carub.0003s3233 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13686860-13691859 Capsella rubella
Carub.0003s3233 5.0kb downstream 5.0kb downstream 7788 true scaffold_3: 13679072-13686859 Capsella rubella
Carub.0003s3233 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13679072-13684071 Capsella rubella
Carub.0003s3233 10.0kb upstream 10.0kb upstream 12788 true scaffold_3: 13684072-13696859 Capsella rubella
Carub.0003s3233 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13686860-13696859 Capsella rubella
Carub.0003s3233 10.0kb downstream 10.0kb downstream 12788 true scaffold_3: 13674072-13686859 Capsella rubella
Carub.0003s3233 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13674072-13684071 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379737 5261 Brassicaceae View MSA
123838594 5264 Brassicales-Malvales View MSA
124351569 5266 SBM View MSA
124242476 5268 Malvidae View MSA
124068521 5270 Rosid View MSA
123742729 5271 Pentapetalae View MSA
122786942 5272 Eudicot View MSA
122050588 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain