Gene : Carub.0003s2833 C. rubella v1.1
Defline:  (1 of 12) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  2833
Name:  ? Carub.0003s2833 Secondary Identifier:  ? PAC:39239734
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2833 0.5kb upstream 0.5kb upstream 884 true scaffold_3: 11717974-11718857 Capsella rubella
Carub.0003s2833 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11717974-11718473 Capsella rubella
Carub.0003s2833 0.5kb downstream 0.5kb downstream 884 true scaffold_3: 11718474-11719357 Capsella rubella
Carub.0003s2833 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11718858-11719357 Capsella rubella
Carub.0003s2833 1.0kb upstream 1.0kb upstream 1384 true scaffold_3: 11717474-11718857 Capsella rubella
Carub.0003s2833 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11717474-11718473 Capsella rubella
Carub.0003s2833 1.0kb downstream 1.0kb downstream 1384 true scaffold_3: 11718474-11719857 Capsella rubella
Carub.0003s2833 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11718858-11719857 Capsella rubella
Carub.0003s2833 2.0kb upstream 2.0kb upstream 2384 true scaffold_3: 11716474-11718857 Capsella rubella
Carub.0003s2833 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11716474-11718473 Capsella rubella
Carub.0003s2833 2.0kb downstream 2.0kb downstream 2384 true scaffold_3: 11718474-11720857 Capsella rubella
Carub.0003s2833 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11718858-11720857 Capsella rubella
Carub.0003s2833 5.0kb upstream 5.0kb upstream 5384 true scaffold_3: 11713474-11718857 Capsella rubella
Carub.0003s2833 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11713474-11718473 Capsella rubella
Carub.0003s2833 5.0kb downstream 5.0kb downstream 5384 true scaffold_3: 11718474-11723857 Capsella rubella
Carub.0003s2833 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11718858-11723857 Capsella rubella
Carub.0003s2833 10.0kb upstream 10.0kb upstream 10384 true scaffold_3: 11708474-11718857 Capsella rubella
Carub.0003s2833 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11708474-11718473 Capsella rubella
Carub.0003s2833 10.0kb downstream 10.0kb downstream 10384 true scaffold_3: 11718474-11728857 Capsella rubella
Carub.0003s2833 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11718858-11728857 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335988 5261 Brassicaceae Singleton cluster - no MSA
123776727 5264 Brassicales-Malvales Singleton cluster - no MSA
124275111 5266 SBM Singleton cluster - no MSA
124252681 5268 Malvidae View MSA
124074483 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain