Gene : Carub.0003s2881 C. rubella v1.1
Defline:  (1 of 1) PTHR32370:SF4 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 Genomic Order:  2881
Name:  ? Carub.0003s2881 Secondary Identifier:  ? PAC:39240535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2881 0.5kb upstream 0.5kb upstream 4757 true scaffold_3: 12048642-12053398 Capsella rubella
Carub.0003s2881 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12048642-12049141 Capsella rubella
Carub.0003s2881 0.5kb downstream 0.5kb downstream 4757 true scaffold_3: 12049142-12053898 Capsella rubella
Carub.0003s2881 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12053399-12053898 Capsella rubella
Carub.0003s2881 1.0kb upstream 1.0kb upstream 5257 true scaffold_3: 12048142-12053398 Capsella rubella
Carub.0003s2881 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12048142-12049141 Capsella rubella
Carub.0003s2881 1.0kb downstream 1.0kb downstream 5257 true scaffold_3: 12049142-12054398 Capsella rubella
Carub.0003s2881 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12053399-12054398 Capsella rubella
Carub.0003s2881 2.0kb upstream 2.0kb upstream 6257 true scaffold_3: 12047142-12053398 Capsella rubella
Carub.0003s2881 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12047142-12049141 Capsella rubella
Carub.0003s2881 2.0kb downstream 2.0kb downstream 6257 true scaffold_3: 12049142-12055398 Capsella rubella
Carub.0003s2881 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12053399-12055398 Capsella rubella
Carub.0003s2881 5.0kb upstream 5.0kb upstream 9257 true scaffold_3: 12044142-12053398 Capsella rubella
Carub.0003s2881 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12044142-12049141 Capsella rubella
Carub.0003s2881 5.0kb downstream 5.0kb downstream 9257 true scaffold_3: 12049142-12058398 Capsella rubella
Carub.0003s2881 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12053399-12058398 Capsella rubella
Carub.0003s2881 10.0kb upstream 10.0kb upstream 14257 true scaffold_3: 12039142-12053398 Capsella rubella
Carub.0003s2881 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12039142-12049141 Capsella rubella
Carub.0003s2881 10.0kb downstream 10.0kb downstream 14257 true scaffold_3: 12049142-12063398 Capsella rubella
Carub.0003s2881 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12053399-12063398 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373974 5261 Brassicaceae View MSA
123827592 5264 Brassicales-Malvales View MSA
124342059 5266 SBM View MSA
124243534 5268 Malvidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain