Gene : Carub.0003s2891 C. rubella v1.1
Defline:  (1 of 1) PTHR23201//PTHR23201:SF15 - EXTENSIN, PROLINE-RICH PROTEIN // GIBBERELLIN-REGULATED PROTEIN 7 Genomic Order:  2891
Name:  ? Carub.0003s2891 Secondary Identifier:  ? PAC:39239989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2891 0.5kb upstream 0.5kb upstream 1565 true scaffold_3: 12136807-12138371 Capsella rubella
Carub.0003s2891 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12136807-12137306 Capsella rubella
Carub.0003s2891 0.5kb downstream 0.5kb downstream 1565 true scaffold_3: 12137307-12138871 Capsella rubella
Carub.0003s2891 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12138372-12138871 Capsella rubella
Carub.0003s2891 1.0kb upstream 1.0kb upstream 2065 true scaffold_3: 12136307-12138371 Capsella rubella
Carub.0003s2891 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12136307-12137306 Capsella rubella
Carub.0003s2891 1.0kb downstream 1.0kb downstream 2065 true scaffold_3: 12137307-12139371 Capsella rubella
Carub.0003s2891 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12138372-12139371 Capsella rubella
Carub.0003s2891 2.0kb upstream 2.0kb upstream 3065 true scaffold_3: 12135307-12138371 Capsella rubella
Carub.0003s2891 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12135307-12137306 Capsella rubella
Carub.0003s2891 2.0kb downstream 2.0kb downstream 3065 true scaffold_3: 12137307-12140371 Capsella rubella
Carub.0003s2891 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12138372-12140371 Capsella rubella
Carub.0003s2891 5.0kb upstream 5.0kb upstream 6065 true scaffold_3: 12132307-12138371 Capsella rubella
Carub.0003s2891 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12132307-12137306 Capsella rubella
Carub.0003s2891 5.0kb downstream 5.0kb downstream 6065 true scaffold_3: 12137307-12143371 Capsella rubella
Carub.0003s2891 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12138372-12143371 Capsella rubella
Carub.0003s2891 10.0kb upstream 10.0kb upstream 11065 true scaffold_3: 12127307-12138371 Capsella rubella
Carub.0003s2891 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12127307-12137306 Capsella rubella
Carub.0003s2891 10.0kb downstream 10.0kb downstream 11065 true scaffold_3: 12137307-12148371 Capsella rubella
Carub.0003s2891 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12138372-12148371 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363211 5261 Brassicaceae View MSA
123840450 5264 Brassicales-Malvales View MSA
124322721 5266 SBM View MSA
124252864 5268 Malvidae View MSA
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain