Gene : Carub.0003s2906 C. rubella v1.1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  2906
Name:  ? Carub.0003s2906 Secondary Identifier:  ? PAC:39239582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2906 0.5kb upstream 0.5kb upstream 1178 true scaffold_3: 12243592-12244769 Capsella rubella
Carub.0003s2906 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12243592-12244091 Capsella rubella
Carub.0003s2906 0.5kb downstream 0.5kb downstream 1178 true scaffold_3: 12244092-12245269 Capsella rubella
Carub.0003s2906 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12244770-12245269 Capsella rubella
Carub.0003s2906 1.0kb upstream 1.0kb upstream 1678 true scaffold_3: 12243092-12244769 Capsella rubella
Carub.0003s2906 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12243092-12244091 Capsella rubella
Carub.0003s2906 1.0kb downstream 1.0kb downstream 1678 true scaffold_3: 12244092-12245769 Capsella rubella
Carub.0003s2906 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12244770-12245769 Capsella rubella
Carub.0003s2906 2.0kb upstream 2.0kb upstream 2678 true scaffold_3: 12242092-12244769 Capsella rubella
Carub.0003s2906 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12242092-12244091 Capsella rubella
Carub.0003s2906 2.0kb downstream 2.0kb downstream 2678 true scaffold_3: 12244092-12246769 Capsella rubella
Carub.0003s2906 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12244770-12246769 Capsella rubella
Carub.0003s2906 5.0kb upstream 5.0kb upstream 5678 true scaffold_3: 12239092-12244769 Capsella rubella
Carub.0003s2906 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12239092-12244091 Capsella rubella
Carub.0003s2906 5.0kb downstream 5.0kb downstream 5678 true scaffold_3: 12244092-12249769 Capsella rubella
Carub.0003s2906 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12244770-12249769 Capsella rubella
Carub.0003s2906 10.0kb upstream 10.0kb upstream 10678 true scaffold_3: 12234092-12244769 Capsella rubella
Carub.0003s2906 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12234092-12244091 Capsella rubella
Carub.0003s2906 10.0kb downstream 10.0kb downstream 10678 true scaffold_3: 12244092-12254769 Capsella rubella
Carub.0003s2906 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12244770-12254769 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373074 5261 Brassicaceae View MSA
123833762 5264 Brassicales-Malvales View MSA
124345921 5266 SBM View MSA
124238439 5268 Malvidae View MSA
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain