Gene : Carub.0003s0426 C. rubella v1.1

Defline:  (1 of 4) PTHR20863//PTHR20863:SF29 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  426
Name:  ? Carub.0003s0426 Secondary Identifier:  ? PAC:39242034

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0426 0.5kb upstream 0.5kb upstream 1882 true scaffold_3: 1422844-1424725 Capsella rubella
Carub.0003s0426 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1424226-1424725 Capsella rubella
Carub.0003s0426 0.5kb downstream 0.5kb downstream 1882 true scaffold_3: 1422344-1424225 Capsella rubella
Carub.0003s0426 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1422344-1422843 Capsella rubella
Carub.0003s0426 1.0kb upstream 1.0kb upstream 2382 true scaffold_3: 1422844-1425225 Capsella rubella
Carub.0003s0426 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1424226-1425225 Capsella rubella
Carub.0003s0426 1.0kb downstream 1.0kb downstream 2382 true scaffold_3: 1421844-1424225 Capsella rubella
Carub.0003s0426 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1421844-1422843 Capsella rubella
Carub.0003s0426 2.0kb upstream 2.0kb upstream 3382 true scaffold_3: 1422844-1426225 Capsella rubella
Carub.0003s0426 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1424226-1426225 Capsella rubella
Carub.0003s0426 2.0kb downstream 2.0kb downstream 3382 true scaffold_3: 1420844-1424225 Capsella rubella
Carub.0003s0426 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1420844-1422843 Capsella rubella
Carub.0003s0426 5.0kb upstream 5.0kb upstream 6382 true scaffold_3: 1422844-1429225 Capsella rubella
Carub.0003s0426 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1424226-1429225 Capsella rubella
Carub.0003s0426 5.0kb downstream 5.0kb downstream 6382 true scaffold_3: 1417844-1424225 Capsella rubella
Carub.0003s0426 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1417844-1422843 Capsella rubella
Carub.0003s0426 10.0kb upstream 10.0kb upstream 11382 true scaffold_3: 1422844-1434225 Capsella rubella
Carub.0003s0426 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1424226-1434225 Capsella rubella
Carub.0003s0426 10.0kb downstream 10.0kb downstream 11382 true scaffold_3: 1412844-1424225 Capsella rubella
Carub.0003s0426 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1412844-1422843 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363905 5261 Brassicaceae View MSA
123838939 5264 Brassicales-Malvales View MSA
124349812 5266 SBM View MSA
124251681 5268 Malvidae View MSA
124069665 5270 Rosid View MSA
123741889 5271 Pentapetalae View MSA
122795656 5272 Eudicot View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain