Gene : Carub.0003s0446 C. rubella v1.1
Defline:  (1 of 1) K10849 - DNA excision repair protein ERCC-1 (ERCC1) Genomic Order:  446
Name:  ? Carub.0003s0446 Secondary Identifier:  ? PAC:39241624
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0446 0.5kb upstream 0.5kb upstream 2814 true scaffold_3: 1512944-1515757 Capsella rubella
Carub.0003s0446 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1512944-1513443 Capsella rubella
Carub.0003s0446 0.5kb downstream 0.5kb downstream 2814 true scaffold_3: 1513444-1516257 Capsella rubella
Carub.0003s0446 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1515758-1516257 Capsella rubella
Carub.0003s0446 1.0kb upstream 1.0kb upstream 3314 true scaffold_3: 1512444-1515757 Capsella rubella
Carub.0003s0446 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1512444-1513443 Capsella rubella
Carub.0003s0446 1.0kb downstream 1.0kb downstream 3314 true scaffold_3: 1513444-1516757 Capsella rubella
Carub.0003s0446 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1515758-1516757 Capsella rubella
Carub.0003s0446 2.0kb upstream 2.0kb upstream 4314 true scaffold_3: 1511444-1515757 Capsella rubella
Carub.0003s0446 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1511444-1513443 Capsella rubella
Carub.0003s0446 2.0kb downstream 2.0kb downstream 4314 true scaffold_3: 1513444-1517757 Capsella rubella
Carub.0003s0446 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1515758-1517757 Capsella rubella
Carub.0003s0446 5.0kb upstream 5.0kb upstream 7314 true scaffold_3: 1508444-1515757 Capsella rubella
Carub.0003s0446 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1508444-1513443 Capsella rubella
Carub.0003s0446 5.0kb downstream 5.0kb downstream 7314 true scaffold_3: 1513444-1520757 Capsella rubella
Carub.0003s0446 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1515758-1520757 Capsella rubella
Carub.0003s0446 10.0kb upstream 10.0kb upstream 12314 true scaffold_3: 1503444-1515757 Capsella rubella
Carub.0003s0446 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1503444-1513443 Capsella rubella
Carub.0003s0446 10.0kb downstream 10.0kb downstream 12314 true scaffold_3: 1513444-1525757 Capsella rubella
Carub.0003s0446 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1515758-1525757 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364690 5261 Brassicaceae View MSA
123828145 5264 Brassicales-Malvales View MSA
124344112 5266 SBM View MSA
124238638 5268 Malvidae View MSA
124066559 5270 Rosid View MSA
123737106 5271 Pentapetalae View MSA
122787410 5272 Eudicot View MSA
122045728 5273 Angiosperm View MSA
121344888 5274 Embryophyte View MSA
123427474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain