Gene : Carub.0003s0485 C. rubella v1.1
Defline:  (1 of 3) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  485
Name:  ? Carub.0003s0485 Secondary Identifier:  ? PAC:39241092
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0485 0.5kb upstream 0.5kb upstream 2021 true scaffold_3: 1641006-1643026 Capsella rubella
Carub.0003s0485 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1641006-1641505 Capsella rubella
Carub.0003s0485 0.5kb downstream 0.5kb downstream 2021 true scaffold_3: 1641506-1643526 Capsella rubella
Carub.0003s0485 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1643027-1643526 Capsella rubella
Carub.0003s0485 1.0kb upstream 1.0kb upstream 2521 true scaffold_3: 1640506-1643026 Capsella rubella
Carub.0003s0485 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1640506-1641505 Capsella rubella
Carub.0003s0485 1.0kb downstream 1.0kb downstream 2521 true scaffold_3: 1641506-1644026 Capsella rubella
Carub.0003s0485 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1643027-1644026 Capsella rubella
Carub.0003s0485 2.0kb upstream 2.0kb upstream 3521 true scaffold_3: 1639506-1643026 Capsella rubella
Carub.0003s0485 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1639506-1641505 Capsella rubella
Carub.0003s0485 2.0kb downstream 2.0kb downstream 3521 true scaffold_3: 1641506-1645026 Capsella rubella
Carub.0003s0485 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1643027-1645026 Capsella rubella
Carub.0003s0485 5.0kb upstream 5.0kb upstream 6521 true scaffold_3: 1636506-1643026 Capsella rubella
Carub.0003s0485 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1636506-1641505 Capsella rubella
Carub.0003s0485 5.0kb downstream 5.0kb downstream 6521 true scaffold_3: 1641506-1648026 Capsella rubella
Carub.0003s0485 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1643027-1648026 Capsella rubella
Carub.0003s0485 10.0kb upstream 10.0kb upstream 11521 true scaffold_3: 1631506-1643026 Capsella rubella
Carub.0003s0485 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1631506-1641505 Capsella rubella
Carub.0003s0485 10.0kb downstream 10.0kb downstream 11521 true scaffold_3: 1641506-1653026 Capsella rubella
Carub.0003s0485 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1643027-1653026 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379648 5261 Brassicaceae View MSA
123833742 5264 Brassicales-Malvales View MSA
124343134 5266 SBM View MSA
124253339 5268 Malvidae View MSA
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain