Gene : Carub.0003s0479 C. rubella v1.1
Defline:  (1 of 3) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  479
Name:  ? Carub.0003s0479 Secondary Identifier:  ? PAC:39240649
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0479 0.5kb upstream 0.5kb upstream 2148 true scaffold_3: 1621855-1624002 Capsella rubella
Carub.0003s0479 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1621855-1622354 Capsella rubella
Carub.0003s0479 0.5kb downstream 0.5kb downstream 2148 true scaffold_3: 1622355-1624502 Capsella rubella
Carub.0003s0479 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1624003-1624502 Capsella rubella
Carub.0003s0479 1.0kb upstream 1.0kb upstream 2648 true scaffold_3: 1621355-1624002 Capsella rubella
Carub.0003s0479 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1621355-1622354 Capsella rubella
Carub.0003s0479 1.0kb downstream 1.0kb downstream 2648 true scaffold_3: 1622355-1625002 Capsella rubella
Carub.0003s0479 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1624003-1625002 Capsella rubella
Carub.0003s0479 2.0kb upstream 2.0kb upstream 3648 true scaffold_3: 1620355-1624002 Capsella rubella
Carub.0003s0479 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1620355-1622354 Capsella rubella
Carub.0003s0479 2.0kb downstream 2.0kb downstream 3648 true scaffold_3: 1622355-1626002 Capsella rubella
Carub.0003s0479 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1624003-1626002 Capsella rubella
Carub.0003s0479 5.0kb upstream 5.0kb upstream 6648 true scaffold_3: 1617355-1624002 Capsella rubella
Carub.0003s0479 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1617355-1622354 Capsella rubella
Carub.0003s0479 5.0kb downstream 5.0kb downstream 6648 true scaffold_3: 1622355-1629002 Capsella rubella
Carub.0003s0479 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1624003-1629002 Capsella rubella
Carub.0003s0479 10.0kb upstream 10.0kb upstream 11648 true scaffold_3: 1612355-1624002 Capsella rubella
Carub.0003s0479 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1612355-1622354 Capsella rubella
Carub.0003s0479 10.0kb downstream 10.0kb downstream 11648 true scaffold_3: 1622355-1634002 Capsella rubella
Carub.0003s0479 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1624003-1634002 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366671 5261 Brassicaceae View MSA
123832312 5264 Brassicales-Malvales View MSA
124341369 5266 SBM View MSA
124251782 5268 Malvidae View MSA
124071747 5270 Rosid View MSA
123747287 5271 Pentapetalae View MSA
122790209 5272 Eudicot View MSA
122043264 5273 Angiosperm View MSA
121343982 5274 Embryophyte View MSA
123379951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain