Gene : Carub.0003s0122 C. rubella v1.1

Defline:  (1 of 1) PTHR11802//PTHR11802:SF43 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SERINE CARBOXYPEPTIDASE-LIKE 25 Genomic Order:  122
Name:  ? Carub.0003s0122 Secondary Identifier:  ? PAC:39241226

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0122 0.5kb upstream 0.5kb upstream 3390 true scaffold_3: 384611-388000 Capsella rubella
Carub.0003s0122 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 387501-388000 Capsella rubella
Carub.0003s0122 0.5kb downstream 0.5kb downstream 3390 true scaffold_3: 384111-387500 Capsella rubella
Carub.0003s0122 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 384111-384610 Capsella rubella
Carub.0003s0122 1.0kb upstream 1.0kb upstream 3890 true scaffold_3: 384611-388500 Capsella rubella
Carub.0003s0122 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 387501-388500 Capsella rubella
Carub.0003s0122 1.0kb downstream 1.0kb downstream 3890 true scaffold_3: 383611-387500 Capsella rubella
Carub.0003s0122 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 383611-384610 Capsella rubella
Carub.0003s0122 2.0kb upstream 2.0kb upstream 4890 true scaffold_3: 384611-389500 Capsella rubella
Carub.0003s0122 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 387501-389500 Capsella rubella
Carub.0003s0122 2.0kb downstream 2.0kb downstream 4890 true scaffold_3: 382611-387500 Capsella rubella
Carub.0003s0122 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 382611-384610 Capsella rubella
Carub.0003s0122 5.0kb upstream 5.0kb upstream 7890 true scaffold_3: 384611-392500 Capsella rubella
Carub.0003s0122 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 387501-392500 Capsella rubella
Carub.0003s0122 5.0kb downstream 5.0kb downstream 7890 true scaffold_3: 379611-387500 Capsella rubella
Carub.0003s0122 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 379611-384610 Capsella rubella
Carub.0003s0122 10.0kb upstream 10.0kb upstream 12890 true scaffold_3: 384611-397500 Capsella rubella
Carub.0003s0122 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 387501-397500 Capsella rubella
Carub.0003s0122 10.0kb downstream 10.0kb downstream 12890 true scaffold_3: 374611-387500 Capsella rubella
Carub.0003s0122 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 374611-384610 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374268 5261 Brassicaceae View MSA
123827339 5264 Brassicales-Malvales View MSA
124342084 5266 SBM View MSA
124249274 5268 Malvidae View MSA
124064863 5270 Rosid View MSA
123740378 5271 Pentapetalae View MSA
122786591 5272 Eudicot View MSA
122047242 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain