Gene : Carub.0003s0144 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  144
Name:  ? Carub.0003s0144 Secondary Identifier:  ? PAC:39242364
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0144 0.5kb upstream 0.5kb upstream 3386 true scaffold_3: 487468-490853 Capsella rubella
Carub.0003s0144 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 490354-490853 Capsella rubella
Carub.0003s0144 0.5kb downstream 0.5kb downstream 3386 true scaffold_3: 486968-490353 Capsella rubella
Carub.0003s0144 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 486968-487467 Capsella rubella
Carub.0003s0144 1.0kb upstream 1.0kb upstream 3886 true scaffold_3: 487468-491353 Capsella rubella
Carub.0003s0144 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 490354-491353 Capsella rubella
Carub.0003s0144 1.0kb downstream 1.0kb downstream 3886 true scaffold_3: 486468-490353 Capsella rubella
Carub.0003s0144 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 486468-487467 Capsella rubella
Carub.0003s0144 2.0kb upstream 2.0kb upstream 4886 true scaffold_3: 487468-492353 Capsella rubella
Carub.0003s0144 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 490354-492353 Capsella rubella
Carub.0003s0144 2.0kb downstream 2.0kb downstream 4886 true scaffold_3: 485468-490353 Capsella rubella
Carub.0003s0144 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 485468-487467 Capsella rubella
Carub.0003s0144 5.0kb upstream 5.0kb upstream 7886 true scaffold_3: 487468-495353 Capsella rubella
Carub.0003s0144 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 490354-495353 Capsella rubella
Carub.0003s0144 5.0kb downstream 5.0kb downstream 7886 true scaffold_3: 482468-490353 Capsella rubella
Carub.0003s0144 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 482468-487467 Capsella rubella
Carub.0003s0144 10.0kb upstream 10.0kb upstream 12886 true scaffold_3: 487468-500353 Capsella rubella
Carub.0003s0144 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 490354-500353 Capsella rubella
Carub.0003s0144 10.0kb downstream 10.0kb downstream 12886 true scaffold_3: 477468-490353 Capsella rubella
Carub.0003s0144 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 477468-487467 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373042 5261 Brassicaceae View MSA
123831915 5264 Brassicales-Malvales View MSA
124343248 5266 SBM View MSA
124237949 5268 Malvidae View MSA
124063770 5270 Rosid View MSA
123736958 5271 Pentapetalae View MSA
122790433 5272 Eudicot View MSA
122047420 5273 Angiosperm View MSA
121310738 5274 Embryophyte View MSA
123348150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain