Gene : Carub.0003s0581 C. rubella v1.1
Defline:  (1 of 3) PTHR10110//PTHR10110:SF117 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 1-RELATED Genomic Order:  581
Name:  ? Carub.0003s0581 Secondary Identifier:  ? PAC:39241659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0581 0.5kb upstream 0.5kb upstream 3684 true scaffold_3: 1971294-1974977 Capsella rubella
Carub.0003s0581 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1974478-1974977 Capsella rubella
Carub.0003s0581 0.5kb downstream 0.5kb downstream 3684 true scaffold_3: 1970794-1974477 Capsella rubella
Carub.0003s0581 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1970794-1971293 Capsella rubella
Carub.0003s0581 1.0kb upstream 1.0kb upstream 4184 true scaffold_3: 1971294-1975477 Capsella rubella
Carub.0003s0581 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1974478-1975477 Capsella rubella
Carub.0003s0581 1.0kb downstream 1.0kb downstream 4184 true scaffold_3: 1970294-1974477 Capsella rubella
Carub.0003s0581 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1970294-1971293 Capsella rubella
Carub.0003s0581 2.0kb upstream 2.0kb upstream 5184 true scaffold_3: 1971294-1976477 Capsella rubella
Carub.0003s0581 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1974478-1976477 Capsella rubella
Carub.0003s0581 2.0kb downstream 2.0kb downstream 5184 true scaffold_3: 1969294-1974477 Capsella rubella
Carub.0003s0581 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1969294-1971293 Capsella rubella
Carub.0003s0581 5.0kb upstream 5.0kb upstream 8184 true scaffold_3: 1971294-1979477 Capsella rubella
Carub.0003s0581 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1974478-1979477 Capsella rubella
Carub.0003s0581 5.0kb downstream 5.0kb downstream 8184 true scaffold_3: 1966294-1974477 Capsella rubella
Carub.0003s0581 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1966294-1971293 Capsella rubella
Carub.0003s0581 10.0kb upstream 10.0kb upstream 13184 true scaffold_3: 1971294-1984477 Capsella rubella
Carub.0003s0581 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1974478-1984477 Capsella rubella
Carub.0003s0581 10.0kb downstream 10.0kb downstream 13184 true scaffold_3: 1961294-1974477 Capsella rubella
Carub.0003s0581 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1961294-1971293 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379473 5261 Brassicaceae View MSA
123841290 5264 Brassicales-Malvales View MSA
124337994 5266 SBM View MSA
124252576 5268 Malvidae View MSA
124071378 5270 Rosid View MSA
123745225 5271 Pentapetalae View MSA
122787432 5272 Eudicot View MSA
122047449 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain