Gene : Carub.0003s0592 C. rubella v1.1
Defline:  (1 of 2) PTHR11157:SF13 - PROTEIN ELO-8, ISOFORM A Genomic Order:  592
Name:  ? Carub.0003s0592 Secondary Identifier:  ? PAC:39242689
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5080 Capsella rubella pathologic  
Crubella PWY-6433 Capsella rubella pathologic  
Crubella PWY-6598 Capsella rubella pathologic  
Crubella PWY-7036 Capsella rubella pathologic  
Crubella PWY-7601 Capsella rubella pathologic  
Crubella PWY-7619 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0592 0.5kb upstream 0.5kb upstream 1478 true scaffold_3: 2011979-2013456 Capsella rubella
Carub.0003s0592 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2011979-2012478 Capsella rubella
Carub.0003s0592 0.5kb downstream 0.5kb downstream 1478 true scaffold_3: 2012479-2013956 Capsella rubella
Carub.0003s0592 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2013457-2013956 Capsella rubella
Carub.0003s0592 1.0kb upstream 1.0kb upstream 1978 true scaffold_3: 2011479-2013456 Capsella rubella
Carub.0003s0592 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2011479-2012478 Capsella rubella
Carub.0003s0592 1.0kb downstream 1.0kb downstream 1978 true scaffold_3: 2012479-2014456 Capsella rubella
Carub.0003s0592 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2013457-2014456 Capsella rubella
Carub.0003s0592 2.0kb upstream 2.0kb upstream 2978 true scaffold_3: 2010479-2013456 Capsella rubella
Carub.0003s0592 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2010479-2012478 Capsella rubella
Carub.0003s0592 2.0kb downstream 2.0kb downstream 2978 true scaffold_3: 2012479-2015456 Capsella rubella
Carub.0003s0592 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2013457-2015456 Capsella rubella
Carub.0003s0592 5.0kb upstream 5.0kb upstream 5978 true scaffold_3: 2007479-2013456 Capsella rubella
Carub.0003s0592 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2007479-2012478 Capsella rubella
Carub.0003s0592 5.0kb downstream 5.0kb downstream 5978 true scaffold_3: 2012479-2018456 Capsella rubella
Carub.0003s0592 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2013457-2018456 Capsella rubella
Carub.0003s0592 10.0kb upstream 10.0kb upstream 10978 true scaffold_3: 2002479-2013456 Capsella rubella
Carub.0003s0592 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2002479-2012478 Capsella rubella
Carub.0003s0592 10.0kb downstream 10.0kb downstream 10978 true scaffold_3: 2012479-2023456 Capsella rubella
Carub.0003s0592 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2013457-2023456 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364090 5261 Brassicaceae View MSA
123833809 5264 Brassicales-Malvales View MSA
124321899 5266 SBM View MSA
124248997 5268 Malvidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain