Gene : Carub.0003s0604 C. rubella v1.1
Defline:  (1 of 1) 2.7.1.6 - Galactokinase Genomic Order:  604
Name:  ? Carub.0003s0604 Secondary Identifier:  ? PAC:39241194
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3821 Capsella rubella pathologic  
Crubella PWY-6527 Capsella rubella pathologic  
Crubella PWY66-422 Capsella rubella pathologic  
Crubella PWY-7344 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0604 0.5kb upstream 0.5kb upstream 3386 true scaffold_3: 2075979-2079364 Capsella rubella
Carub.0003s0604 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2078865-2079364 Capsella rubella
Carub.0003s0604 0.5kb downstream 0.5kb downstream 3386 true scaffold_3: 2075479-2078864 Capsella rubella
Carub.0003s0604 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2075479-2075978 Capsella rubella
Carub.0003s0604 1.0kb upstream 1.0kb upstream 3886 true scaffold_3: 2075979-2079864 Capsella rubella
Carub.0003s0604 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2078865-2079864 Capsella rubella
Carub.0003s0604 1.0kb downstream 1.0kb downstream 3886 true scaffold_3: 2074979-2078864 Capsella rubella
Carub.0003s0604 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2074979-2075978 Capsella rubella
Carub.0003s0604 2.0kb upstream 2.0kb upstream 4886 true scaffold_3: 2075979-2080864 Capsella rubella
Carub.0003s0604 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2078865-2080864 Capsella rubella
Carub.0003s0604 2.0kb downstream 2.0kb downstream 4886 true scaffold_3: 2073979-2078864 Capsella rubella
Carub.0003s0604 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2073979-2075978 Capsella rubella
Carub.0003s0604 5.0kb upstream 5.0kb upstream 7886 true scaffold_3: 2075979-2083864 Capsella rubella
Carub.0003s0604 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2078865-2083864 Capsella rubella
Carub.0003s0604 5.0kb downstream 5.0kb downstream 7886 true scaffold_3: 2070979-2078864 Capsella rubella
Carub.0003s0604 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2070979-2075978 Capsella rubella
Carub.0003s0604 10.0kb upstream 10.0kb upstream 12886 true scaffold_3: 2075979-2088864 Capsella rubella
Carub.0003s0604 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2078865-2088864 Capsella rubella
Carub.0003s0604 10.0kb downstream 10.0kb downstream 12886 true scaffold_3: 2065979-2078864 Capsella rubella
Carub.0003s0604 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2065979-2075978 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364076 5261 Brassicaceae View MSA
123829397 5264 Brassicales-Malvales View MSA
124342034 5266 SBM View MSA
124248055 5268 Malvidae View MSA
124065862 5270 Rosid View MSA
123740112 5271 Pentapetalae View MSA
122791585 5272 Eudicot View MSA
122044418 5273 Angiosperm View MSA
121346867 5274 Embryophyte View MSA
123425103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain