Gene : Carub.0003s0615 C. rubella v1.1
Defline:  (1 of 1) PTHR11699//PTHR11699:SF25 - ALDEHYDE DEHYDROGENASE-RELATED // ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED Genomic Order:  615
Name:  ? Carub.0003s0615 Secondary Identifier:  ? PAC:39242953
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2724 Capsella rubella pathologic  
Crubella PWY-6054 Capsella rubella pathologic  
Crubella PWY66-21 Capsella rubella pathologic  
Crubella PWY66-389 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0615 0.5kb upstream 0.5kb upstream 4450 true scaffold_3: 2123295-2127744 Capsella rubella
Carub.0003s0615 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2127245-2127744 Capsella rubella
Carub.0003s0615 0.5kb downstream 0.5kb downstream 4450 true scaffold_3: 2122795-2127244 Capsella rubella
Carub.0003s0615 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2122795-2123294 Capsella rubella
Carub.0003s0615 1.0kb upstream 1.0kb upstream 4950 true scaffold_3: 2123295-2128244 Capsella rubella
Carub.0003s0615 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2127245-2128244 Capsella rubella
Carub.0003s0615 1.0kb downstream 1.0kb downstream 4950 true scaffold_3: 2122295-2127244 Capsella rubella
Carub.0003s0615 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2122295-2123294 Capsella rubella
Carub.0003s0615 2.0kb upstream 2.0kb upstream 5950 true scaffold_3: 2123295-2129244 Capsella rubella
Carub.0003s0615 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2127245-2129244 Capsella rubella
Carub.0003s0615 2.0kb downstream 2.0kb downstream 5950 true scaffold_3: 2121295-2127244 Capsella rubella
Carub.0003s0615 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2121295-2123294 Capsella rubella
Carub.0003s0615 5.0kb upstream 5.0kb upstream 8950 true scaffold_3: 2123295-2132244 Capsella rubella
Carub.0003s0615 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2127245-2132244 Capsella rubella
Carub.0003s0615 5.0kb downstream 5.0kb downstream 8950 true scaffold_3: 2118295-2127244 Capsella rubella
Carub.0003s0615 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2118295-2123294 Capsella rubella
Carub.0003s0615 10.0kb upstream 10.0kb upstream 13950 true scaffold_3: 2123295-2137244 Capsella rubella
Carub.0003s0615 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2127245-2137244 Capsella rubella
Carub.0003s0615 10.0kb downstream 10.0kb downstream 13950 true scaffold_3: 2113295-2127244 Capsella rubella
Carub.0003s0615 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2113295-2123294 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365590 5261 Brassicaceae View MSA
123833442 5264 Brassicales-Malvales View MSA
124345840 5266 SBM View MSA
124239129 5268 Malvidae View MSA
124060659 5270 Rosid View MSA
123739453 5271 Pentapetalae View MSA
122786006 5272 Eudicot View MSA
122043329 5273 Angiosperm View MSA
121348017 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain