Gene : Carub.0003s0379 C. rubella v1.1
Defline:  (1 of 3) PTHR31358//PTHR31358:SF4 - FAMILY NOT NAMED // PROTEIN WAVE-DAMPENED 2-RELATED Genomic Order:  379
Name:  ? Carub.0003s0379 Secondary Identifier:  ? PAC:39240171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0379 0.5kb upstream 0.5kb upstream 2663 true scaffold_3: 1262848-1265510 Capsella rubella
Carub.0003s0379 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1262848-1263347 Capsella rubella
Carub.0003s0379 0.5kb downstream 0.5kb downstream 2663 true scaffold_3: 1263348-1266010 Capsella rubella
Carub.0003s0379 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1265511-1266010 Capsella rubella
Carub.0003s0379 1.0kb upstream 1.0kb upstream 3163 true scaffold_3: 1262348-1265510 Capsella rubella
Carub.0003s0379 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1262348-1263347 Capsella rubella
Carub.0003s0379 1.0kb downstream 1.0kb downstream 3163 true scaffold_3: 1263348-1266510 Capsella rubella
Carub.0003s0379 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1265511-1266510 Capsella rubella
Carub.0003s0379 2.0kb upstream 2.0kb upstream 4163 true scaffold_3: 1261348-1265510 Capsella rubella
Carub.0003s0379 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1261348-1263347 Capsella rubella
Carub.0003s0379 2.0kb downstream 2.0kb downstream 4163 true scaffold_3: 1263348-1267510 Capsella rubella
Carub.0003s0379 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1265511-1267510 Capsella rubella
Carub.0003s0379 5.0kb upstream 5.0kb upstream 7163 true scaffold_3: 1258348-1265510 Capsella rubella
Carub.0003s0379 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1258348-1263347 Capsella rubella
Carub.0003s0379 5.0kb downstream 5.0kb downstream 7163 true scaffold_3: 1263348-1270510 Capsella rubella
Carub.0003s0379 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1265511-1270510 Capsella rubella
Carub.0003s0379 10.0kb upstream 10.0kb upstream 12163 true scaffold_3: 1253348-1265510 Capsella rubella
Carub.0003s0379 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1253348-1263347 Capsella rubella
Carub.0003s0379 10.0kb downstream 10.0kb downstream 12163 true scaffold_3: 1263348-1275510 Capsella rubella
Carub.0003s0379 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1265511-1275510 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360580 5261 Brassicaceae View MSA
123797982 5264 Brassicales-Malvales View MSA
124295673 5266 SBM View MSA
124148049 5268 Malvidae View MSA
124062203 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain