Gene : Carub.0003s0399 C. rubella v1.1
Defline:  (1 of 3) PTHR24362:SF255 - SERINE/THREONINE-PROTEIN KINASE NEK1 Genomic Order:  399
Name:  ? Carub.0003s0399 Secondary Identifier:  ? PAC:39241480
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0399 0.5kb upstream 0.5kb upstream 4732 true scaffold_3: 1332053-1336784 Capsella rubella
Carub.0003s0399 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1332053-1332552 Capsella rubella
Carub.0003s0399 0.5kb downstream 0.5kb downstream 4732 true scaffold_3: 1332553-1337284 Capsella rubella
Carub.0003s0399 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1336785-1337284 Capsella rubella
Carub.0003s0399 1.0kb upstream 1.0kb upstream 5232 true scaffold_3: 1331553-1336784 Capsella rubella
Carub.0003s0399 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1331553-1332552 Capsella rubella
Carub.0003s0399 1.0kb downstream 1.0kb downstream 5232 true scaffold_3: 1332553-1337784 Capsella rubella
Carub.0003s0399 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1336785-1337784 Capsella rubella
Carub.0003s0399 2.0kb upstream 2.0kb upstream 6232 true scaffold_3: 1330553-1336784 Capsella rubella
Carub.0003s0399 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1330553-1332552 Capsella rubella
Carub.0003s0399 2.0kb downstream 2.0kb downstream 6232 true scaffold_3: 1332553-1338784 Capsella rubella
Carub.0003s0399 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1336785-1338784 Capsella rubella
Carub.0003s0399 5.0kb upstream 5.0kb upstream 9232 true scaffold_3: 1327553-1336784 Capsella rubella
Carub.0003s0399 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1327553-1332552 Capsella rubella
Carub.0003s0399 5.0kb downstream 5.0kb downstream 9232 true scaffold_3: 1332553-1341784 Capsella rubella
Carub.0003s0399 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1336785-1341784 Capsella rubella
Carub.0003s0399 10.0kb upstream 10.0kb upstream 14232 true scaffold_3: 1322553-1336784 Capsella rubella
Carub.0003s0399 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1322553-1332552 Capsella rubella
Carub.0003s0399 10.0kb downstream 10.0kb downstream 14232 true scaffold_3: 1332553-1346784 Capsella rubella
Carub.0003s0399 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1336785-1346784 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375139 5261 Brassicaceae View MSA
123841661 5264 Brassicales-Malvales View MSA
124342661 5266 SBM View MSA
124247909 5268 Malvidae View MSA
124070127 5270 Rosid View MSA
123743821 5271 Pentapetalae View MSA
122789481 5272 Eudicot View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain