Gene : Carub.0003s0389 C. rubella v1.1
Defline:  (1 of 2) PTHR22595//PTHR22595:SF62 - CHITINASE-RELATED // HEVEIN-LIKE PREPROPROTEIN Genomic Order:  389
Name:  ? Carub.0003s0389 Secondary Identifier:  ? PAC:39241232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0389 0.5kb upstream 0.5kb upstream 1512 true scaffold_3: 1286898-1288409 Capsella rubella
Carub.0003s0389 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1287910-1288409 Capsella rubella
Carub.0003s0389 0.5kb downstream 0.5kb downstream 1512 true scaffold_3: 1286398-1287909 Capsella rubella
Carub.0003s0389 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1286398-1286897 Capsella rubella
Carub.0003s0389 1.0kb upstream 1.0kb upstream 2012 true scaffold_3: 1286898-1288909 Capsella rubella
Carub.0003s0389 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1287910-1288909 Capsella rubella
Carub.0003s0389 1.0kb downstream 1.0kb downstream 2012 true scaffold_3: 1285898-1287909 Capsella rubella
Carub.0003s0389 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1285898-1286897 Capsella rubella
Carub.0003s0389 2.0kb upstream 2.0kb upstream 3012 true scaffold_3: 1286898-1289909 Capsella rubella
Carub.0003s0389 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1287910-1289909 Capsella rubella
Carub.0003s0389 2.0kb downstream 2.0kb downstream 3012 true scaffold_3: 1284898-1287909 Capsella rubella
Carub.0003s0389 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1284898-1286897 Capsella rubella
Carub.0003s0389 5.0kb upstream 5.0kb upstream 6012 true scaffold_3: 1286898-1292909 Capsella rubella
Carub.0003s0389 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1287910-1292909 Capsella rubella
Carub.0003s0389 5.0kb downstream 5.0kb downstream 6012 true scaffold_3: 1281898-1287909 Capsella rubella
Carub.0003s0389 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1281898-1286897 Capsella rubella
Carub.0003s0389 10.0kb upstream 10.0kb upstream 11012 true scaffold_3: 1286898-1297909 Capsella rubella
Carub.0003s0389 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1287910-1297909 Capsella rubella
Carub.0003s0389 10.0kb downstream 10.0kb downstream 11012 true scaffold_3: 1276898-1287909 Capsella rubella
Carub.0003s0389 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1276898-1286897 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375037 5261 Brassicaceae View MSA
123828440 5264 Brassicales-Malvales View MSA
124343100 5266 SBM View MSA
124249005 5268 Malvidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain